RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PDE6AP16499 860 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 ADORA2AP29274 412 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 USP14P54578 494 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 RTP1P59025 263 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 GUCD1Q96NT3 240 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 STXBP5LQ9Y2K9 1186 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 GOLIM4O00461 696 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 AKR1B1P15121 316 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 ERCC3P19447 782 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 PLS1Q14651 629 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 ATG4CQ96DT6 458 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 ARMT1Q9H993 441 aa13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 COL11A1P12107 1806 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-220ENST00000593104 MYH8P13535 1937 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 PARP14Q460N5 1801 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 GLRX3O76003 335 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 IGHA2P01877 340 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 HOXC6P09630 235 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 C9orf50Q5SZB4 431 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 GPR153Q6NV75 609 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 SH3RF1Q7Z6J0 888 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 DPP9Q86TI2 863 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 LPAR1Q92633 364 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 SPATC1LQ9H0A9 340 aa13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-220ENST00000593104 ZNFX1Q9P2E3 1918 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 TCRBV5S4A2TA0A5A2 114 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 COG2Q14746 738 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 SHHQ15465 462 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 TRIM60Q495X7 471 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 FAM47AQ5JRC9 791 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 LENG1Q96BZ8 264 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 LBHD1Q9BQE6 289 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 SMCHD1A6NHR9 2005 aa13.59□□□□□ -0.23
PRKCSH-220ENST00000593104 ZNF236Q9UL36 1845 aa13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 DNM1LO00429 736 aa13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 BADQ92934 168 aa13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 COL25A1Q9BXS0 654 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 CRNKL1Q9BZJ0 848 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 FBXO28Q9NVF7 368 aa13.58□□□□□ -0.24
PRKCSH-220ENST00000593104 FLOT1O75955 427 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 MBD4O95243 580 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 PGK2P07205 417 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 DSG3P32926 999 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 SLC39A5Q6ZMH5 540 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
PRKCSH-220ENST00000593104 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 MSCO60682 206 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 TAL1P17542 331 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 ITGB8P26012 769 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 ICA1Q05084 483 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 TMEM132BQ14DG7 1078 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 MAML3Q96JK9 1138 aa13.56□□□□□ -0.24
PRKCSH-220ENST00000593104 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 SEPT4O43236 478 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 RAD21O60216 631 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 IGSF3O75054 1194 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 LRRC41Q15345 812 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 TMEM179Q6ZVK1 233 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.242e-8■■□□□ 11.7
PRKCSH-220ENST00000593104 PDLIM7Q9NR12 457 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 PRKAG2Q9UGJ0 569 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 DNAH12Q6ZR08 3092 aa13.55□□□□□ -0.24
PRKCSH-220ENST00000593104 KBTBD13C9JR72 458 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 PGK1P00558 417 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 EEF2P13639 858 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 ADD2P35612 726 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 CDK8P49336 464 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 EPHB4P54760 987 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 IRX5P78411 483 aaPredicted RBP13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 TTF1Q15361 905 aaPredicted RBP13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 ZNF697Q5TEC3 545 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 MIER1Q8N108 512 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 CLASRPQ8N2M8 674 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 NUP88Q99567 741 aaPredicted RBP13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 CDX2Q99626 313 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms