RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PARK7Q99497 189 aaKnown RBP11.38□□□□□ -0.59
DDX39A-220ENST00000593008 AS3MTQ9HBK9 375 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 HPS5Q9UPZ3 1129 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 TSPY2A6NKD2 308 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
DDX39A-220ENST00000593008 ZKSCAN1P17029 563 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-220ENST00000593008 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
DDX39A-220ENST00000593008 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 C17orf99Q6UX52 265 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 RALYLQ86SE5 291 aaKnown RBP11.37□□□□□ -0.59
DDX39A-220ENST00000593008 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 CEP95Q96GE4 821 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 NEK1Q96PY6 1258 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 RNF41Q9H4P4 317 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-220ENST00000593008 EFCC1Q9HA90 598 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 PLIN4Q96Q06 1357 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 HTTP42858 3142 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 PHIPQ8WWQ0 1821 aa11.37□□□□□ -0.59
DDX39A-220ENST00000593008 TNKSO95271 1327 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 ADGRA2Q96PE1 1338 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 SH2B2O14492 632 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 EPB41L2O43491 1005 aaKnown RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 TSPY3P0CV98 308 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 TSPY8P0CW00 308 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 BACE1P56817 501 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 LACTBP83111 547 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 ATP2B2Q01814 1243 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 PKN2Q16513 984 aaKnown RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 FBXO46Q6PJ61 603 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 ENAHQ8N8S7 591 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 NEDD1Q8NHV4 660 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 IL17RAQ96F46 866 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 FEZ1Q99689 392 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 MYL10Q9BUA6 226 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 TBC1D2Q9BYX2 928 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
DDX39A-220ENST00000593008 ZSWIM6Q9HCJ5 1215 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 CABP5Q9NP86 173 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
DDX39A-220ENST00000593008 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 LARGE1O95461 756 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 RXRAP19793 462 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 CTGFP29279 349 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 SOX10P56693 466 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 ANAPC15P60006 121 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 ICA1Q05084 483 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 KIF22Q14807 665 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 SEC23AQ15436 765 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 BLOC1S2Q6QNY1 142 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 ZNF444Q8N0Y2 327 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-220ENST00000593008 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-220ENST00000593008 ESR2Q92731 530 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 TTC14Q96N46 770 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-220ENST00000593008 KRT23Q9C075 422 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 GINM1Q9NU53 330 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 PTPN22Q9Y2R2 807 aa11.35□□□□□ -0.59
DDX39A-220ENST00000593008 IFIT3O14879 490 aaKnown RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 PSMC4P43686 418 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 AK2P54819 239 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 APOBRQ0VD83 1088 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 TRDNQ13061 729 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 TOB2Q14106 344 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 KRT32Q14532 448 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 TMEM67Q5HYA8 995 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 Q6ZUG5 572 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 ANKRD13CQ8N6S4 541 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 NUP88Q99567 741 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-220ENST00000593008 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 BRPF3Q9ULD4 1205 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 STX8Q9UNK0 236 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 SLC45A1Q9Y2W3 748 aa11.34□□□□□ -0.59
DDX39A-220ENST00000593008 CENPFP49454 3210 aa11.33□□□□□ -0.6
DDX39A-220ENST00000593008 C19orf81C9J6K1 198 aa11.33□□□□□ -0.6
DDX39A-220ENST00000593008 PEX10O60683 326 aa11.33□□□□□ -0.6
DDX39A-220ENST00000593008 BCRP11274 1271 aa11.33□□□□□ -0.6
DDX39A-220ENST00000593008 OSBPP22059 807 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms