RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 STAG1Q8WVM7 1258 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 MCOLN1Q9GZU1 580 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 CLIP2Q9UDT6 1046 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 PNMA3Q9UL41 463 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 TNRC18O15417 2968 aaPredicted RBP18.16■□□□□ 0.5
TRIM47-206ENST00000592942 NMT2O60551 498 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 PEX10O60683 326 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 TSPY3P0CV98 308 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 TSPY8P0CW00 308 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 ATP2B2Q01814 1243 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 OTOP1Q7RTM1 612 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 ERO1AQ96HE7 468 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 ESYT1Q9BSJ8 1104 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 RPAP3Q9H6T3 665 aaPredicted RBP18.16■□□□□ 0.5
TRIM47-206ENST00000592942 RBPJLQ9UBG7 517 aa18.16■□□□□ 0.5
TRIM47-206ENST00000592942 RANBP6O60518 1105 aaKnown RBP18.15■□□□□ 0.5
TRIM47-206ENST00000592942 GCLCP48506 637 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-206ENST00000592942 HERVK_113P62684 666 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 MFSD6Q6ZSS7 791 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 SMCR8Q8TEV9 937 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-206ENST00000592942 LPAR1Q92633 364 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 TXNRD2Q9NNW7 524 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 PCDH10Q9P2E7 1040 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
TRIM47-206ENST00000592942 TTLL1O95922 423 aa18.14■□□□□ 0.49
TRIM47-206ENST00000592942 PCP11498 1178 aaKnown RBP18.14■□□□□ 0.49
TRIM47-206ENST00000592942 IRX3P78415 501 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-206ENST00000592942 Q3C1V9 767 aa18.14■□□□□ 0.49
TRIM47-206ENST00000592942 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
TRIM47-206ENST00000592942 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
TRIM47-206ENST00000592942 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
TRIM47-206ENST00000592942 TRIM17Q9Y577 477 aa18.14■□□□□ 0.49
TRIM47-206ENST00000592942 NEDD4P46934 1319 aa18.14■□□□□ 0.49
TRIM47-206ENST00000592942 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 F5H6K3 240 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 CNMDO75829 334 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 KLRC3Q07444 240 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 FAM110CQ1W6H9 321 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
TRIM47-206ENST00000592942 LBX2Q6XYB7 198 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 TRIM47Q96LD4 638 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 EFCC1Q9HA90 598 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 TAF6LQ9Y6J9 622 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 ZSWIM8A7E2V4 1837 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 RLFQ13129 1914 aa18.13■□□□□ 0.49
TRIM47-206ENST00000592942 WDR46O15213 610 aaKnown RBP18.12■□□□□ 0.49
TRIM47-206ENST00000592942 ECM2O94769 699 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-206ENST00000592942 CYP21A2P08686 494 aa18.12■□□□□ 0.49
TRIM47-206ENST00000592942 PSMC4P43686 418 aa18.12■□□□□ 0.49
TRIM47-206ENST00000592942 COG2Q14746 738 aa18.12■□□□□ 0.49
TRIM47-206ENST00000592942 PKN2Q16513 984 aaKnown RBP18.12■□□□□ 0.49
TRIM47-206ENST00000592942 IMMTQ16891 758 aaKnown RBP18.12■□□□□ 0.49
TRIM47-206ENST00000592942 RNF41Q9H4P4 317 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-206ENST00000592942 SYNPO2Q9UMS6 1093 aa18.12■□□□□ 0.49
TRIM47-206ENST00000592942 PTPN22Q9Y2R2 807 aa18.12■□□□□ 0.49
TRIM47-206ENST00000592942 SPDYE16A6NNV3 312 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-206ENST00000592942 NDUFB10O96000 172 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 TOMM22Q9NS69 142 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 HOXC10Q9NYD6 342 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 BTBD7Q9P203 1132 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 ZSWIM5Q9P217 1185 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-206ENST00000592942 HTTP42858 3142 aa18.11■□□□□ 0.49
TRIM47-206ENST00000592942 LAMA4Q16363 1823 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 CDC45O75419 566 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 DSG3P32926 999 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 FAM83BQ5T0W9 1011 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 FBXO46Q6PJ61 603 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-206ENST00000592942 LRRC47Q8N1G4 583 aaKnown RBP18.1■□□□□ 0.49
TRIM47-206ENST00000592942 GMCL1P1Q8NEA9 526 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 NUP88Q99567 741 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-206ENST00000592942 FBXO28Q9NVF7 368 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 RBM8AQ9Y5S9 174 aaKnown RBP18.1■□□□□ 0.49
TRIM47-206ENST00000592942 DOCK3Q8IZD9 2030 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 MYH4Q9Y623 1939 aa18.1■□□□□ 0.49
TRIM47-206ENST00000592942 B4E1Z4 1266 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 ERVK-9P63128 1117 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 ERVK-24P63145 666 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 KIF22Q14807 665 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 NECTIN1Q15223 517 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 GPRC5AQ8NFJ5 357 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 TANGO6Q9C0B7 1094 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 RABGAP1Q9Y3P9 1069 aa18.09■□□□□ 0.49
TRIM47-206ENST00000592942 KDM4AO75164 1064 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 FMNL1O95466 1100 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-206ENST00000592942 GNRH1P01148 92 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 ARHGEF6Q15052 776 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 SLFN13Q68D06 897 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 STOX1Q6ZVD7 989 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 GTF3C2Q8WUA4 911 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-206ENST00000592942 ANKS1AQ92625 1134 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 ESR2Q92731 530 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms