RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PATL2C9JE40 543 aaKnown RBP16.6■□□□□ 0.25
APOC1-208ENST00000592535 GJB1P08034 283 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 RASA1P20936 1047 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 MAPK4P31152 587 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 B4GALNT3Q6L9W6 998 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 LBX2Q6XYB7 198 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 IFNL3Q8IZI9 196 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.6■□□□□ 0.25
APOC1-208ENST00000592535 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 BTBD7Q9P203 1132 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 BRCA2P51587 3418 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
APOC1-208ENST00000592535 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
APOC1-208ENST00000592535 CYP2B6P20813 491 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 GJA8P48165 433 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 GPR142Q7Z601 462 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
APOC1-208ENST00000592535 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 LPAR1Q92633 364 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 EVI5LQ96CN4 794 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 TANGO6Q9C0B7 1094 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
APOC1-208ENST00000592535 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
APOC1-208ENST00000592535 COG2Q14746 738 aa16.58■□□□□ 0.24
APOC1-208ENST00000592535 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
APOC1-208ENST00000592535 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
APOC1-208ENST00000592535 NKX2-3Q8TAU0 364 aa16.58■□□□□ 0.24
APOC1-208ENST00000592535 SOCS4Q8WXH5 440 aa16.58■□□□□ 0.24
APOC1-208ENST00000592535 TRIB2Q92519 343 aa16.58■□□□□ 0.24
APOC1-208ENST00000592535 FOXP2O15409 715 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 PRDM1O75626 825 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 HMGCRP04035 888 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 CCNA1P78396 465 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 TRIM32Q13049 653 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 MORN1Q5T089 497 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 U2AF1L4Q8WU68 220 aaKnown RBP16.57■□□□□ 0.24
APOC1-208ENST00000592535 USP6NLQ92738 828 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 NAPBQ9H115 298 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 CWC22Q9HCG8 908 aaKnown RBP16.57■□□□□ 0.24
APOC1-208ENST00000592535 HOXC10Q9NYD6 342 aa16.57■□□□□ 0.24
APOC1-208ENST00000592535 WDR46O15213 610 aaKnown RBP16.56■□□□□ 0.24
APOC1-208ENST00000592535 SGPL1O95470 568 aa16.56■□□□□ 0.24
APOC1-208ENST00000592535 DSG3P32926 999 aa16.56■□□□□ 0.24
APOC1-208ENST00000592535 WDR78Q5VTH9 848 aa16.56■□□□□ 0.24
APOC1-208ENST00000592535 CHD1LQ86WJ1 897 aa16.56■□□□□ 0.24
APOC1-208ENST00000592535 DEFB118Q96PH6 123 aa16.56■□□□□ 0.24
APOC1-208ENST00000592535 PAK6Q9NQU5 681 aaPredicted RBP16.56■□□□□ 0.24
APOC1-208ENST00000592535 FLOT1O75955 427 aa16.55■□□□□ 0.24
APOC1-208ENST00000592535 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
APOC1-208ENST00000592535 RGS2P41220 211 aa16.55■□□□□ 0.24
APOC1-208ENST00000592535 NUCB1Q02818 461 aa16.55■□□□□ 0.24
APOC1-208ENST00000592535 PPARAQ07869 468 aa16.55■□□□□ 0.24
APOC1-208ENST00000592535 ATG4CQ96DT6 458 aa16.55■□□□□ 0.24
APOC1-208ENST00000592535 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■■■■□ 19.8
APOC1-208ENST00000592535 GOPCQ9HD26 462 aa16.55■□□□□ 0.24
APOC1-208ENST00000592535 MKI67P46013 3256 aaKnown RBP16.55■□□□□ 0.24
APOC1-208ENST00000592535 IGKV6D-41A0A0C4DH26 115 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 TRIM6-TRIM34B2RNG4 842 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 RAD21O60216 631 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 PTPREP23469 700 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 MAP2K5Q13163 448 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 CCL14Q16627 93 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
APOC1-208ENST00000592535 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 ZNF444Q8N0Y2 327 aaPredicted RBP16.54■□□□□ 0.24
APOC1-208ENST00000592535 FAM227BQ96M60 508 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 APBA2Q99767 749 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 MOV10L1Q9BXT6 1211 aaKnown RBP16.54■□□□□ 0.24
APOC1-208ENST00000592535 SPATC1LQ9H0A9 340 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 NYAP2Q9P242 653 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 ZNF236Q9UL36 1845 aa16.54■□□□□ 0.24
APOC1-208ENST00000592535 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
APOC1-208ENST00000592535 SLC15A5A6NIM6 579 aa16.53■□□□□ 0.24
APOC1-208ENST00000592535 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
APOC1-208ENST00000592535 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
APOC1-208ENST00000592535 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
APOC1-208ENST00000592535 UBE2Q1Q7Z7E8 422 aa16.53■□□□□ 0.24
APOC1-208ENST00000592535 RILPL2Q969X0 211 aa16.53■□□□□ 0.24
APOC1-208ENST00000592535 HMX1Q9NP08 348 aaPredicted RBP16.53■□□□□ 0.24
APOC1-208ENST00000592535 FBXO28Q9NVF7 368 aa16.53■□□□□ 0.24
APOC1-208ENST00000592535 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
APOC1-208ENST00000592535 FARP2O94887 1054 aaPredicted RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 TFRCP02786 760 aaKnown RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 SLC3A2P08195 630 aaKnown RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 PRKAR2AP13861 404 aaKnown RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 CTDSPL2Q05D32 466 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 PDE4BQ07343 736 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 GRB14Q14449 540 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 PLS1Q14651 629 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms