RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 SERTAD1Q9UHV2 236 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 HOOK1Q9UJC3 728 aaKnown RBP22.56■■□□□ 1.2
MBD3-209ENST00000592012 GAKO14976 1311 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 PPEF1O14829 653 aaPredicted RBP22.56■■□□□ 1.2
MBD3-209ENST00000592012 BMP15O95972 392 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 NLRP5P59047 1200 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 LRRC8AQ8IWT6 810 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 HSD3B7Q9H2F3 369 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 MAD2L2Q9UI95 211 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 LRRC37AA6NMS7 1700 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 GRM4Q14833 912 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 POSTNQ15063 836 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 SLF2Q8IX21 1173 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 ZNF287Q9HBT7 754 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 ATP6V0A2Q9Y487 856 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 FLT1P17948 1338 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 BMP6P22004 513 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 ZNF827Q17R98 1081 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 NT5DC1Q5TFE4 455 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 C16orf86Q6ZW13 317 aa22.55■■□□□ 1.2
MBD3-209ENST00000592012 ADAMTS3O15072 1205 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 ACTN4O43707 911 aaKnown RBP22.54■■□□□ 1.2
MBD3-209ENST00000592012 CDK8P49336 464 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 TPM4P67936 248 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 ZNF174Q15697 407 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 TTC38Q5R3I4 469 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 PDILTQ8N807 584 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 FERMT2Q96AC1 680 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 TMEM47Q9BQJ4 181 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 SARSP49591 514 aaKnown RBP22.54■■□□□ 1.2
MBD3-209ENST00000592012 STX8Q9UNK0 236 aa22.54■■□□□ 1.2
MBD3-209ENST00000592012 SRGNP10124 158 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 GNAQP50148 359 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 GTF2IP78347 998 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 ARID5BQ14865 1188 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 COL23A1Q86Y22 540 aaPredicted RBP22.53■■□□□ 1.2
MBD3-209ENST00000592012 FBXO41Q8TF61 875 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 EPSTI1Q96J88 318 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 XPO4Q9C0E2 1151 aaKnown RBP22.53■■□□□ 1.2
MBD3-209ENST00000592012 SH3GLB2Q9NR46 395 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 TRAPPC10P48553 1259 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 KANK3Q6NY19 840 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 OLFM4Q6UX06 510 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 PIK3AP1Q6ZUJ8 805 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 FILIP1Q7Z7B0 1213 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 IFNKQ9P0W0 207 aa22.53■■□□□ 1.2
MBD3-209ENST00000592012 RIMBP2O15034 1052 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 PRR29P0C7W0 189 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 LMOD1P29536 600 aaPredicted RBP22.52■■□□□ 1.2
MBD3-209ENST00000592012 ATP2C1P98194 919 aaPredicted RBP22.52■■□□□ 1.2
MBD3-209ENST00000592012 PTGDRQ13258 359 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 SLC35G1Q2M3R5 365 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 AKT1S1Q96B36 256 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 COA1Q9GZY4 146 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 MAN1B1Q9UKM7 699 aa22.52■■□□□ 1.2
MBD3-209ENST00000592012 DDX60LQ5H9U9 1706 aaKnown RBP22.52■■□□□ 1.2
MBD3-209ENST00000592012 PLSCR1O15162 318 aa22.52■■□□□ 1.19
MBD3-209ENST00000592012 NEMFO60524 1076 aa22.52■■□□□ 1.19
MBD3-209ENST00000592012 CALML3P27482 149 aa22.52■■□□□ 1.19
MBD3-209ENST00000592012 MYL5Q02045 173 aa22.52■■□□□ 1.19
MBD3-209ENST00000592012 EYA3Q99504 573 aa22.52■■□□□ 1.19
MBD3-209ENST00000592012 MYH1P12882 1939 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 A0A087X0B3 334 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 PALM3A6NDB9 673 aaPredicted RBP22.51■■□□□ 1.19
MBD3-209ENST00000592012 CYTH3O43739 400 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 NEDD1Q8NHV4 660 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 SPATA20Q8TB22 786 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 DAGLAQ9Y4D2 1042 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 SNED1Q8TER0 1413 aa22.51■■□□□ 1.19
MBD3-209ENST00000592012 SMC2O95347 1197 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 GRAMD1CQ8IYS0 662 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 SYMPKQ92797 1274 aaKnown RBP22.5■■□□□ 1.19
MBD3-209ENST00000592012 GPKOWQ92917 476 aaPredicted RBP eCLIP22.5■■□□□ 1.19
MBD3-209ENST00000592012 OSBPL5Q9H0X9 879 aaPredicted RBP22.5■■□□□ 1.19
MBD3-209ENST00000592012 ATP1A3P13637 1013 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 TYW1BQ6NUM6 668 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 BLIDQ8IZY5 108 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 SMARCE1Q969G3 411 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 IMPACTQ9P2X3 320 aa22.5■■□□□ 1.19
MBD3-209ENST00000592012 NPR1P16066 1061 aa22.49■■□□□ 1.19
MBD3-209ENST00000592012 FANCCQ00597 558 aa22.49■■□□□ 1.19
MBD3-209ENST00000592012 PCDHA4Q9UN74 947 aa22.49■■□□□ 1.19
MBD3-209ENST00000592012 MORC3Q14149 939 aa22.49■■□□□ 1.19
MBD3-209ENST00000592012 ZC3H12CQ9C0D7 883 aaKnown RBP22.49■■□□□ 1.19
MBD3-209ENST00000592012 SUGT1Q9Y2Z0 365 aa22.49■■□□□ 1.19
MBD3-209ENST00000592012 NRXN2Q9P2S2 1712 aa22.49■■□□□ 1.19
MBD3-209ENST00000592012 UQCRHLA0A096LP55 91 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 UQCRHP07919 91 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 DHX58Q96C10 678 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 MTMR7Q9Y216 660 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 VWA3AA6NCI4 1184 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 M0R2N6 131 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 SLFN14P0C7P3 912 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 GSDMDP57764 484 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 CERS5Q8N5B7 392 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 TRIML1Q8N9V2 468 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 PRIMPOLQ96LW4 560 aa22.48■■□□□ 1.19
MBD3-209ENST00000592012 LZTS2Q9BRK4 669 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms