RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TDRD3Q9H7E2 651 aaKnown RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 AATFQ9NY61 560 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 KIAA1024Q9UPX6 916 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 POLR2AP24928 1970 aaKnown RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 OTOFQ9HC10 1997 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 GAKO14976 1311 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 ZNF532Q9HCE3 1301 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 RFX7Q2KHR2 1363 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 MYH1P12882 1939 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 BAZ2AQ9UIF9 1905 aaKnown RBP7.7□□□□□ -1.18
VPS4B-205ENST00000591383 TCP10L2B9ZVM9 353 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 IGSF3O75054 1194 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 MBD4O95243 580 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 LDHCP07864 332 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 GSPT1P15170 499 aaKnown RBP7.7□□□□□ -1.18
VPS4B-205ENST00000591383 MMP14P50281 582 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 HIRAP54198 1017 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-205ENST00000591383 HDLBPQ00341 1268 aaKnown RBP7.7□□□□□ -1.18
VPS4B-205ENST00000591383 PICALMQ13492 652 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
VPS4B-205ENST00000591383 ZSCAN25Q6NSZ9 544 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 HHIPL2Q6UWX4 724 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 KRT26Q7Z3Y9 468 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 SH3RF1Q7Z6J0 888 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 ADGRA1Q86SQ6 560 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 TEX11Q8IYF3 940 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 SIX5Q8N196 739 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 SMC1BQ8NDV3 1235 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 ZNF384Q8TF68 577 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 GLIS2Q9BZE0 524 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-205ENST00000591383 ZNF408Q9H9D4 720 aa7.7□□□□□ -1.18
VPS4B-205ENST00000591383 PAPPA2Q9BXP8 1791 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 LAMA4Q16363 1823 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 TRAF5O00463 557 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 BAG3O95817 575 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 CHGBP05060 677 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 ADD2P35612 726 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 DYNLL1P63167 89 aaKnown RBP7.69□□□□□ -1.18
VPS4B-205ENST00000591383 SLC4A8Q2Y0W8 1093 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 CDC42EP5Q6NZY7 148 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 SH3RF3Q8TEJ3 882 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-205ENST00000591383 AIDAQ96BJ3 306 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 EVI5LQ96CN4 794 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 ZBED3Q96IU2 234 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-205ENST00000591383 PRMT6Q96LA8 375 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-205ENST00000591383 ARMT1Q9H993 441 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 DIAPH3Q9NSV4 1193 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 USP40Q9NVE5 1235 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 ZNF70Q9UC06 446 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-205ENST00000591383 MYH8P13535 1937 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 PITPNM2Q9BZ72 1349 aa7.69□□□□□ -1.18
VPS4B-205ENST00000591383 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 SSC5DA1L4H1 1573 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 TCRBV5S4A2TA0A5A2 114 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 M0R2C6 588 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 RNF113AO15541 343 aaKnown RBP7.68□□□□□ -1.18
VPS4B-205ENST00000591383 TLL1O43897 1013 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 PRMT3O60678 531 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 TOMM70O94826 608 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 ADH1BP00325 375 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 ZFYP08048 801 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-205ENST00000591383 SDSP20132 328 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 USP5P45974 858 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 TNNI2P48788 182 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 SEC13P55735 322 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 TCP10Q12799 353 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 NFIAQ12857 509 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 TNFAIP1Q13829 316 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 APOBEC3HQ6NTF7 200 aaKnown RBP7.68□□□□□ -1.18
VPS4B-205ENST00000591383 USP48Q86UV5 1035 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 LCORLQ8N3X6 602 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 APPBP2Q92624 585 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 CDCA5Q96FF9 252 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 CRNKL1Q9BZJ0 848 aaKnown RBP7.68□□□□□ -1.18
VPS4B-205ENST00000591383 OSBPL3Q9H4L5 887 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 CNTNAP1P78357 1384 aa7.68□□□□□ -1.18
VPS4B-205ENST00000591383 RPAP1Q9BWH6 1393 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-205ENST00000591383 ATAD5Q96QE3 1844 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 GPR75-ASB3A0A0A6YYF3 556 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 A0A0D9SFI3 127 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 MARSP56192 900 aaKnown RBP7.67□□□□□ -1.18
VPS4B-205ENST00000591383 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS4B-205ENST00000591383 NMIQ13287 307 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-205ENST00000591383 RASA3Q14644 834 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 UBE3CQ15386 1083 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 OCLNQ16625 522 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 PRAMEF18Q5VWM3 479 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 DLK2Q6UY11 383 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 CCDC129Q6ZRS4 1044 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 MAPKAPK5Q8IW41 473 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-205ENST00000591383 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 SEC62Q99442 399 aaKnown RBP7.67□□□□□ -1.18
VPS4B-205ENST00000591383 TMEM39BQ9GZU3 492 aa7.67□□□□□ -1.18
VPS4B-205ENST00000591383 CXXC1Q9P0U4 656 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-205ENST00000591383 BIN2Q9UBW5 565 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms