RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 HMGB1P09429 215 aaKnown RBP19.57■□□□□ 0.72
GCDH-213ENST00000590627 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 GJA8P48165 433 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 NCOA7Q8NI08 942 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 SMCR8Q8TEV9 937 aaPredicted RBP19.57■□□□□ 0.72
GCDH-213ENST00000590627 DYNLL2Q96FJ2 89 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 JAKMIP1Q96N16 626 aaKnown RBP19.57■□□□□ 0.72
GCDH-213ENST00000590627 NEK1Q96PY6 1258 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 TBC1D2Q9BYX2 928 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 KRT23Q9C075 422 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 ZSWIM6Q9HCJ5 1215 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 SWAP70Q9UH65 585 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 HERC5Q9UII4 1024 aaKnown RBP19.57■□□□□ 0.72
GCDH-213ENST00000590627 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
GCDH-213ENST00000590627 CCL5P13501 91 aa19.56■□□□□ 0.72
GCDH-213ENST00000590627 CDK8P49336 464 aa19.56■□□□□ 0.72
GCDH-213ENST00000590627 TRDNQ13061 729 aa19.56■□□□□ 0.72
GCDH-213ENST00000590627 RABEP1Q15276 862 aa19.56■□□□□ 0.72
GCDH-213ENST00000590627 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
GCDH-213ENST00000590627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.56■□□□□ 0.72
GCDH-213ENST00000590627 INCENPQ9NQS7 918 aa19.56■□□□□ 0.72
GCDH-213ENST00000590627 BIN2Q9UBW5 565 aaPredicted RBP19.56■□□□□ 0.72
GCDH-213ENST00000590627 NEDD4P46934 1319 aa19.55■□□□□ 0.72
GCDH-213ENST00000590627 IRF5Q13568 498 aa19.55■□□□□ 0.72
GCDH-213ENST00000590627 MB21D2Q8IYB1 491 aaPredicted RBP19.55■□□□□ 0.72
GCDH-213ENST00000590627 RNF208Q9H0X6 261 aa19.55■□□□□ 0.72
GCDH-213ENST00000590627 DNAJC18Q9H819 358 aa19.55■□□□□ 0.72
GCDH-213ENST00000590627 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
GCDH-213ENST00000590627 GABRQQ9UN88 632 aa19.55■□□□□ 0.72
GCDH-213ENST00000590627 CAPN2P17655 700 aa19.54■□□□□ 0.72
GCDH-213ENST00000590627 BLOC1S2Q6QNY1 142 aa19.54■□□□□ 0.72
GCDH-213ENST00000590627 UBE2Q1Q7Z7E8 422 aa19.54■□□□□ 0.72
GCDH-213ENST00000590627 RALYLQ86SE5 291 aaKnown RBP19.54■□□□□ 0.72
GCDH-213ENST00000590627 SLC44A5Q8NCS7 719 aa19.54■□□□□ 0.72
GCDH-213ENST00000590627 PXYLP1Q8TE99 480 aa19.54■□□□□ 0.72
GCDH-213ENST00000590627 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.54■□□□□ 0.72
GCDH-213ENST00000590627 COLQQ9Y215 455 aaPredicted RBP19.54■□□□□ 0.72
GCDH-213ENST00000590627 WDR19Q8NEZ3 1342 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 LOC285556D6RIA3 1793 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 TNPO2O14787 897 aaKnown RBP19.53■□□□□ 0.72
GCDH-213ENST00000590627 ADCY3O60266 1144 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 CASTP20810 708 aaKnown RBP19.53■□□□□ 0.72
GCDH-213ENST00000590627 RASA1P20936 1047 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 SHMT1P34896 483 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 CAP2P40123 477 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 FLT3LGP49771 235 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 FXR1P51114 621 aaKnown RBP eCLIP19.53■□□□□ 0.72
GCDH-213ENST00000590627 FAM110CQ1W6H9 321 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 TATDN1Q6P1N9 297 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 RUFY3Q7L099 469 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 DHX32Q7L7V1 743 aaKnown RBP19.53■□□□□ 0.72
GCDH-213ENST00000590627 CCDC84Q86UT8 332 aaPredicted RBP19.53■□□□□ 0.72
GCDH-213ENST00000590627 STK11IPQ8N1F8 1099 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 CRACR2BQ8N4Y2 399 aaPredicted RBP19.53■□□□□ 0.72
GCDH-213ENST00000590627 ZNF280CQ8ND82 737 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 ESR2Q92731 530 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 MKNK2Q9HBH9 465 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 CYP46A1Q9Y6A2 500 aa19.53■□□□□ 0.72
GCDH-213ENST00000590627 B4E1Z4 1266 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 H0YGN5 161 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 PRDM1O75626 825 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 RPS6KB1P23443 525 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 EXOSC10Q01780 885 aaKnown RBP19.52■□□□□ 0.72
GCDH-213ENST00000590627 PABPC4Q13310 644 aaKnown RBP eCLIP19.52■□□□□ 0.72
GCDH-213ENST00000590627 COL9A3Q14050 684 aaPredicted RBP19.52■□□□□ 0.72
GCDH-213ENST00000590627 U2AF1L4Q8WU68 220 aaKnown RBP19.52■□□□□ 0.72
GCDH-213ENST00000590627 MTA3Q9BTC8 594 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 HTATIP2Q9BUP3 242 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 TRIM34Q9BYJ4 488 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.72
GCDH-213ENST00000590627 KDM4AO75164 1064 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 MCM5P33992 734 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 SPP2Q13103 211 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 RRP12Q5JTH9 1297 aaKnown RBP19.51■□□□□ 0.71
GCDH-213ENST00000590627 TREML2Q5T2D2 321 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 ZNF444Q8N0Y2 327 aaPredicted RBP19.51■□□□□ 0.71
GCDH-213ENST00000590627 FBXL16Q8N461 479 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 COA7Q96BR5 231 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 CCDC17Q96LX7 622 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 UPF3BQ9BZI7 483 aaKnown RBP19.51■□□□□ 0.71
GCDH-213ENST00000590627 ALDH8A1Q9H2A2 487 aaPredicted RBP19.51■□□□□ 0.71
GCDH-213ENST00000590627 TOMM22Q9NS69 142 aa19.51■□□□□ 0.71
GCDH-213ENST00000590627 USP17L5A8MUK1 530 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 RANBP6O60518 1105 aaKnown RBP19.5■□□□□ 0.71
GCDH-213ENST00000590627 SGPL1O95470 568 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 GCLCP48506 637 aaPredicted RBP19.5■□□□□ 0.71
GCDH-213ENST00000590627 NEK4P51957 841 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 ANTXR2P58335 489 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 SH3D19Q5HYK7 790 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 CYB5R4Q7L1T6 521 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 DPF3Q92784 378 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 TTC14Q96N46 770 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 UNC93B1Q9H1C4 597 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
GCDH-213ENST00000590627 TRIOBPQ9H2D6 2365 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms