RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ZHX2Q9Y6X8 837 aa13.54□□□□□ -0.24
SMAD4-211ENST00000590499 A0A0G2JLL6 359 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-211ENST00000590499 FKTNO75072 461 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 JAG1P78504 1218 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 DGKZQ13574 1117 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 TAF1CQ15572 869 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-211ENST00000590499 PRRT2Q7Z6L0 340 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-211ENST00000590499 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
SMAD4-211ENST00000590499 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-211ENST00000590499 SMC5Q8IY18 1101 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 KBTBD3Q8NAB2 608 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 ABHD8Q96I13 439 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
SMAD4-211ENST00000590499 EHD4Q9H223 541 aa13.53□□□□□ -0.24
SMAD4-211ENST00000590499 GLRX3O76003 335 aaKnown RBP13.52□□□□□ -0.25
SMAD4-211ENST00000590499 MBD4O95243 580 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 MX1P20591 662 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 GPAT2Q6NUI2 795 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
SMAD4-211ENST00000590499 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 DCP1AQ9NPI6 582 aaPredicted RBP13.52□□□□□ -0.25
SMAD4-211ENST00000590499 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
SMAD4-211ENST00000590499 MYH8P13535 1937 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 ERC2O15083 957 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 IGHDP01880 384 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 PLCD1P51178 756 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 CAP1Q01518 475 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 GABPAQ06546 454 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 SHROOM1Q2M3G4 852 aaPredicted RBP13.51□□□□□ -0.25
SMAD4-211ENST00000590499 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 ZSCAN25Q6NSZ9 544 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 SDR42E1Q8WUS8 393 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 PUS7LQ9H0K6 701 aaKnown RBP13.51□□□□□ -0.25
SMAD4-211ENST00000590499 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 STAP2Q9UGK3 403 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 ADGRG1Q9Y653 693 aa13.51□□□□□ -0.25
SMAD4-211ENST00000590499 ZSWIM8A7E2V4 1837 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 PDHXO00330 501 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 PRKAB2O43741 272 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 TLR2O60603 784 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 ASNSP08243 561 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 TTC6Q86TZ1 520 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 CRACR2BQ8N4Y2 399 aaPredicted RBP13.5□□□□□ -0.25
SMAD4-211ENST00000590499 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 RWDD1Q9H446 243 aaPredicted RBP13.5□□□□□ -0.25
SMAD4-211ENST00000590499 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
SMAD4-211ENST00000590499 BRCA2P51587 3418 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
SMAD4-211ENST00000590499 GDF11O95390 407 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 SHMT1P34896 483 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 SP3Q02447 781 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 SPP2Q13103 211 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
SMAD4-211ENST00000590499 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 APPBP2Q92624 585 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 OSBP2Q969R2 916 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 WDR18Q9BV38 432 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
SMAD4-211ENST00000590499 ZFYP08048 801 aaPredicted RBP13.48□□□□□ -0.25
SMAD4-211ENST00000590499 CYP2D6P10635 497 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 SLC19A1P41440 591 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 PDE1AP54750 535 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 PKN2Q16513 984 aaKnown RBP13.48□□□□□ -0.25
SMAD4-211ENST00000590499 C17orf99Q6UX52 265 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 CD99L2Q8TCZ2 262 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 STRBPQ96SI9 672 aaKnown RBP13.48□□□□□ -0.25
SMAD4-211ENST00000590499 LNPKQ9C0E8 428 aa13.48□□□□□ -0.25
SMAD4-211ENST00000590499 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
SMAD4-211ENST00000590499 NUCB1Q02818 461 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 SH3D19Q5HYK7 790 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 TREML2Q5T2D2 321 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 GADL1Q6ZQY3 521 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 OTOP1Q7RTM1 612 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 PROCA1Q8NCQ7 364 aaPredicted RBP13.47□□□□□ -0.25
SMAD4-211ENST00000590499 PARK7Q99497 189 aaKnown RBP13.47□□□□□ -0.25
SMAD4-211ENST00000590499 AS3MTQ9HBK9 375 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 AGTPBP1Q9UPW5 1226 aa13.47□□□□□ -0.25
SMAD4-211ENST00000590499 MGAMO43451 1857 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 M0R2C6 588 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 DGAT1O75907 488 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 GH2P01242 217 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 CYP2C8P10632 490 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 BCRP11274 1271 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 DNAJB2P25686 324 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 HMGCS2P54868 508 aa13.46□□□□□ -0.25
SMAD4-211ENST00000590499 BACE1P56817 501 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms