RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
SAFB2-205ENST00000590000 VCANP13611 3396 aa17.2■□□□□ 0.34
SAFB2-205ENST00000590000 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
SAFB2-205ENST00000590000 AACSQ86V21 672 aa17.2■□□□□ 0.34
SAFB2-205ENST00000590000 GTF3C2Q8WUA4 911 aaPredicted RBP17.2■□□□□ 0.34
SAFB2-205ENST00000590000 SDR42E1Q8WUS8 393 aa17.2■□□□□ 0.34
SAFB2-205ENST00000590000 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
SAFB2-205ENST00000590000 IGSF3O75054 1194 aa17.19■□□□□ 0.34
SAFB2-205ENST00000590000 PDE6AP16499 860 aa17.19■□□□□ 0.34
SAFB2-205ENST00000590000 LCORLQ8N3X6 602 aa17.19■□□□□ 0.34
SAFB2-205ENST00000590000 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
SAFB2-205ENST00000590000 MYH8P13535 1937 aa17.18■□□□□ 0.34
SAFB2-205ENST00000590000 PRKAB2O43741 272 aa17.18■□□□□ 0.34
SAFB2-205ENST00000590000 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
SAFB2-205ENST00000590000 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
SAFB2-205ENST00000590000 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
SAFB2-205ENST00000590000 SIRT2Q8IXJ6 389 aa17.18■□□□□ 0.34
SAFB2-205ENST00000590000 LPAR1Q92633 364 aa17.18■□□□□ 0.34
SAFB2-205ENST00000590000 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
SAFB2-205ENST00000590000 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 ADORA2AP29274 412 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 USP14P54578 494 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 MAP3K12Q12852 859 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 TTC6Q86TZ1 520 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 PRUNE2Q8WUY3 3088 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 DCP1AQ9NPI6 582 aaPredicted RBP17.17■□□□□ 0.34
SAFB2-205ENST00000590000 SPTBN5Q9NRC6 3674 aaKnown RBP17.17■□□□□ 0.34
SAFB2-205ENST00000590000 ZBTB40Q9NUA8 1239 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 DDX19BQ9UMR2 479 aa17.17■□□□□ 0.34
SAFB2-205ENST00000590000 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 AKR1B1P15121 316 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 CNGA1P29973 690 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 RTP1P59025 263 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 CCNA1P78396 465 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 FAM161BQ96MY7 647 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
SAFB2-205ENST00000590000 DNM1LO00429 736 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 ERCC3P19447 782 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 ITGB8P26012 769 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 SLC9C2Q5TAH2 1124 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 ATG4CQ96DT6 458 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
SAFB2-205ENST00000590000 GOLIM4O00461 696 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 POLR3DP05423 398 aaPredicted RBP17.14■□□□□ 0.33
SAFB2-205ENST00000590000 COG2Q14746 738 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 SHHQ15465 462 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 SPICE1Q8N0Z3 855 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 COL25A1Q9BXS0 654 aaPredicted RBP17.14■□□□□ 0.33
SAFB2-205ENST00000590000 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
SAFB2-205ENST00000590000 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 FBXO28Q9NVF7 368 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
SAFB2-205ENST00000590000 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
SAFB2-205ENST00000590000 DSG3P32926 999 aa17.13■□□□□ 0.33
SAFB2-205ENST00000590000 SNX17Q15036 470 aa17.13■□□□□ 0.33
SAFB2-205ENST00000590000 OLFML2BQ68BL8 750 aa17.13■□□□□ 0.33
SAFB2-205ENST00000590000 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
SAFB2-205ENST00000590000 MYH7P12883 1935 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TRIM43BA6NCK2 446 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 APBB1O00213 710 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 MPHOSPH10O00566 681 aaKnown RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 GLRX3O76003 335 aaKnown RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TAL1P17542 331 aaPredicted RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TMEM132BQ14DG7 1078 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TRIM60Q495X7 471 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 FAM47AQ5JRC9 791 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 CERS3Q8IU89 383 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TRIM43Q96BQ3 446 aaPredicted RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 DNAJC2Q99543 621 aaKnown RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 CRNKL1Q9BZJ0 848 aaKnown RBP17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TANGO6Q9C0B7 1094 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 TMX2Q9Y320 296 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 IVNS1ABPQ9Y6Y0 642 aa17.12■□□□□ 0.33
SAFB2-205ENST00000590000 EPHB4P54760 987 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 LRRC41Q15345 812 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 FAM109BQ6ICB4 259 aaPredicted RBP17.11■□□□□ 0.33
SAFB2-205ENST00000590000 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 REPS2Q8NFH8 660 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 LENG1Q96BZ8 264 aaPredicted RBP17.11■□□□□ 0.33
SAFB2-205ENST00000590000 MAML3Q96JK9 1138 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 ADAMTS5Q9UNA0 930 aa17.11■□□□□ 0.33
SAFB2-205ENST00000590000 SEPT4O43236 478 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 MSCO60682 206 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 MBD4O95243 580 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 ADD2P35612 726 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 ADCYAP1R1P41586 468 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 TMEM179Q6ZVK1 233 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms