RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 SMARCA5O60264 1052 aaPredicted RBP19.65■□□□□ 0.74
MBD3-206ENST00000589901 TMEM179Q6ZVK1 233 aa19.65■□□□□ 0.74
MBD3-206ENST00000589901 SIAH1Q8IUQ4 282 aa19.65■□□□□ 0.74
MBD3-206ENST00000589901 TANGO6Q9C0B7 1094 aa19.65■□□□□ 0.74
MBD3-206ENST00000589901 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
MBD3-206ENST00000589901 ATP8A2Q9NTI2 1148 aa19.65■□□□□ 0.74
MBD3-206ENST00000589901 SWAP70Q9UH65 585 aa19.65■□□□□ 0.74
MBD3-206ENST00000589901 IVNS1ABPQ9Y6Y0 642 aa19.65■□□□□ 0.74
MBD3-206ENST00000589901 DNAH12Q6ZR08 3092 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 AKR1B1P15121 316 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 SYN1P17600 705 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 GRB14Q14449 540 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 COG2Q14746 738 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 GDF15Q99988 308 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 ALPK3Q96L96 1907 aa19.64■□□□□ 0.73
MBD3-206ENST00000589901 A0A1W2PPC1 479 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 USP17L12C9JPN9 530 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 USP17L21D6R901 530 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 SOX1O00570 391 aaPredicted RBP19.63■□□□□ 0.73
MBD3-206ENST00000589901 HOXC6P09630 235 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 COL6A1P12109 1028 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 MFSD14CQ5VZR4 134 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 MOV10L1Q9BXT6 1211 aaKnown RBP19.63■□□□□ 0.73
MBD3-206ENST00000589901 LRRCC1Q9C099 1032 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 HOXC10Q9NYD6 342 aa19.63■□□□□ 0.73
MBD3-206ENST00000589901 CYP2C19P33261 490 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 CDK8P49336 464 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 ATP2B2Q01814 1243 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 ICA1Q05084 483 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 UBE3CQ15386 1083 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 SPICE1Q8N0Z3 855 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 SLC4A4Q9Y6R1 1079 aa19.62■□□□□ 0.73
MBD3-206ENST00000589901 SPATC1LQ9H0A9 340 aa19.61■□□□□ 0.73
MBD3-206ENST00000589901 PUS7LQ9H0K6 701 aaKnown RBP19.61■□□□□ 0.73
MBD3-206ENST00000589901 ARHGEF10LQ9HCE6 1279 aa19.61■□□□□ 0.73
MBD3-206ENST00000589901 TMX2Q9Y320 296 aa19.61■□□□□ 0.73
MBD3-206ENST00000589901 ERCC3P19447 782 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 ADORA2AP29274 412 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 CNGA1P29973 690 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 DSG3P32926 999 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 LRRC26Q2I0M4 334 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 C16orf86Q6ZW13 317 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 LPAR1Q92633 364 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 LRCH3Q96II8 777 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 CCDC17Q96LX7 622 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 VCPKMTQ9H867 229 aa19.6■□□□□ 0.73
MBD3-206ENST00000589901 FLOT1O75955 427 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 IGHA2P01877 340 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 BMP8BP34820 402 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 MAGEA10P43363 369 aaPredicted RBP19.59■□□□□ 0.73
MBD3-206ENST00000589901 CTR9Q6PD62 1173 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
MBD3-206ENST00000589901 DPP9Q86TI2 863 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 AMOTL1Q8IY63 956 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 TRPV1Q8NER1 839 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 ATG4CQ96DT6 458 aa19.59■□□□□ 0.73
MBD3-206ENST00000589901 DDX20Q9UHI6 824 aaKnown RBP19.59■□□□□ 0.73
MBD3-206ENST00000589901 STRNO43815 780 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.72
MBD3-206ENST00000589901 PLS1Q14651 629 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 ZSCAN25Q6NSZ9 544 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 SHCBP1Q8NEM2 672 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 DDRGK1Q96HY6 314 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 SH2D4AQ9H788 454 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 ECHDC1Q9NTX5 307 aa19.58■□□□□ 0.72
MBD3-206ENST00000589901 COBLO75128 1261 aa19.57■□□□□ 0.72
MBD3-206ENST00000589901 CYBAP13498 195 aa19.57■□□□□ 0.72
MBD3-206ENST00000589901 TSHZ3Q63HK5 1081 aa19.57■□□□□ 0.72
MBD3-206ENST00000589901 MB21D1Q8N884 522 aa19.57■□□□□ 0.72
MBD3-206ENST00000589901 WDR46O15213 610 aaKnown RBP19.56■□□□□ 0.72
MBD3-206ENST00000589901 OLFML2BQ68BL8 750 aa19.56■□□□□ 0.72
MBD3-206ENST00000589901 NCAPG2Q86XI2 1143 aa19.56■□□□□ 0.72
MBD3-206ENST00000589901 STRBPQ96SI9 672 aaKnown RBP19.56■□□□□ 0.72
MBD3-206ENST00000589901 SENP6Q9GZR1 1112 aaPredicted RBP19.56■□□□□ 0.72
MBD3-206ENST00000589901 KANSL2Q9H9L4 492 aa19.56■□□□□ 0.72
MBD3-206ENST00000589901 RLFQ13129 1914 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 MSCO60682 206 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 TMEM132BQ14DG7 1078 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.55■□□□□ 0.72
MBD3-206ENST00000589901 MROH8Q9H579 483 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 DCTPP1Q9H773 170 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 FBXO28Q9NVF7 368 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 COL6A3P12111 3177 aa19.55■□□□□ 0.72
MBD3-206ENST00000589901 BAZ2AQ9UIF9 1905 aaKnown RBP19.55■□□□□ 0.72
MBD3-206ENST00000589901 A0A0G2JMZ2 1700 aa19.54■□□□□ 0.72
MBD3-206ENST00000589901 ANO1Q5XXA6 986 aa19.54■□□□□ 0.72
MBD3-206ENST00000589901 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
MBD3-206ENST00000589901 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
MBD3-206ENST00000589901 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
MBD3-206ENST00000589901 ARPP21Q9UBL0 812 aaPredicted RBP19.54■□□□□ 0.72
MBD3-206ENST00000589901 GSG1L2A8MUP6 293 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 DNM1LO00429 736 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 RAD21O60216 631 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 ATN1P54259 1190 aaPredicted RBP19.53■□□□□ 0.72
MBD3-206ENST00000589901 PRAMEF19Q5SWL8 479 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 TDHQ8IZJ6 230 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 ABRAQ8N0Z2 381 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 UBE2OQ9C0C9 1292 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms