RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 ZNFX1Q9P2E3 1918 aaKnown RBP18.5■□□□□ 0.55
ACTN4-211ENST00000589528 SHMT1P34896 483 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 PLCD1P51178 756 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 OLFML2BQ68BL8 750 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 SLC39A5Q6ZMH5 540 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
ACTN4-211ENST00000589528 MOV10L1Q9BXT6 1211 aaKnown RBP18.49■□□□□ 0.55
ACTN4-211ENST00000589528 SPATC1LQ9H0A9 340 aa18.49■□□□□ 0.55
ACTN4-211ENST00000589528 EYSQ5T1H1 3165 aa18.48■□□□□ 0.55
ACTN4-211ENST00000589528 MAGEB6P1A0A0J9YX57 407 aa18.48■□□□□ 0.55
ACTN4-211ENST00000589528 ERCC3P19447 782 aa18.48■□□□□ 0.55
ACTN4-211ENST00000589528 CRNKL1Q9BZJ0 848 aaKnown RBP18.48■□□□□ 0.55
ACTN4-211ENST00000589528 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
ACTN4-211ENST00000589528 MCM9Q9NXL9 1143 aa18.48■□□□□ 0.55
ACTN4-211ENST00000589528 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
ACTN4-211ENST00000589528 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 SEPT4O43236 478 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 SHHQ15465 462 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 TRIM60Q495X7 471 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 SAMD1Q6SPF0 538 aaPredicted RBP18.47■□□□□ 0.55
ACTN4-211ENST00000589528 AACSQ86V21 672 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 NCAPG2Q86XI2 1143 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 MB21D1Q8N884 522 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 SHCBP1Q8NEM2 672 aa18.47■□□□□ 0.55
ACTN4-211ENST00000589528 FLOT1O75955 427 aa18.46■□□□□ 0.55
ACTN4-211ENST00000589528 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
ACTN4-211ENST00000589528 TTF1Q15361 905 aaPredicted RBP18.46■□□□□ 0.55
ACTN4-211ENST00000589528 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
ACTN4-211ENST00000589528 BADQ92934 168 aa18.46■□□□□ 0.55
ACTN4-211ENST00000589528 A0A0G2JMZ2 1700 aa18.46■□□□□ 0.55
ACTN4-211ENST00000589528 ADCYAP1R1P41586 468 aa18.45■□□□□ 0.54
ACTN4-211ENST00000589528 TMEM179Q6ZVK1 233 aa18.45■□□□□ 0.54
ACTN4-211ENST00000589528 MAFAQ8NHW3 353 aaPredicted RBP18.45■□□□□ 0.54
ACTN4-211ENST00000589528 FERMT2Q96AC1 680 aa18.45■□□□□ 0.54
ACTN4-211ENST00000589528 CDX2Q99626 313 aaPredicted RBP18.45■□□□□ 0.54
ACTN4-211ENST00000589528 RIOK1Q9BRS2 568 aaKnown RBP18.45■□□□□ 0.54
ACTN4-211ENST00000589528 MROH8Q9H579 483 aa18.45■□□□□ 0.54
ACTN4-211ENST00000589528 ARHGEF10LQ9HCE6 1279 aa18.45■□□□□ 0.54
ACTN4-211ENST00000589528 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
ACTN4-211ENST00000589528 PLXNA1Q9UIW2 1896 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 A0A1W2PRG0 241 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 COBLO75128 1261 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 LRRC41Q15345 812 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 ABRAQ8N0Z2 381 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 SH2D4AQ9H788 454 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 PDLIM7Q9NR12 457 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 VCANP13611 3396 aa18.44■□□□□ 0.54
ACTN4-211ENST00000589528 PRUNE2Q8WUY3 3088 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 BAZ2AQ9UIF9 1905 aaKnown RBP18.43■□□□□ 0.54
ACTN4-211ENST00000589528 FCER1AP12319 257 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 DSG3P32926 999 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 GABPAQ06546 454 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 PRAMEF19Q5SWL8 479 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 SEMA6BQ9H3T3 888 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 SWAP70Q9UH65 585 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 EXOC6BQ9Y2D4 811 aa18.43■□□□□ 0.54
ACTN4-211ENST00000589528 PARP14Q460N5 1801 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 IGHA2P01877 340 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 RARBP10826 455 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 PDE6AP16499 860 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 SMAD3P84022 425 aaKnown RBP18.42■□□□□ 0.54
ACTN4-211ENST00000589528 FAM47AQ5JRC9 791 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 SDR42E1Q8WUS8 393 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 ATG4CQ96DT6 458 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 MAML3Q96JK9 1138 aa18.42■□□□□ 0.54
ACTN4-211ENST00000589528 ICA1Q05084 483 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 SNX17Q15036 470 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 HSP90AB4PQ58FF6 505 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 MYLIPQ8WY64 445 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 DNAJC2Q99543 621 aaKnown RBP18.41■□□□□ 0.54
ACTN4-211ENST00000589528 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 XPNPEP3Q9NQH7 507 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
ACTN4-211ENST00000589528 TRIM43BA6NCK2 446 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 SLC25A27O95847 323 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 FOSL2P15408 326 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 EVX2Q03828 476 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 C1orf53Q5VUE5 145 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 SH3RF1Q7Z6J0 888 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 RNF180Q86T96 592 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 TRIM43Q96BQ3 446 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-211ENST00000589528 RNPC3Q96LT9 517 aaKnown RBP18.4■□□□□ 0.54
ACTN4-211ENST00000589528 MMP19Q99542 508 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 IL1RAPL2Q9NP60 686 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 DCP1AQ9NPI6 582 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-211ENST00000589528 TACC3Q9Y6A5 838 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
ACTN4-211ENST00000589528 GOLIM4O00461 696 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 RAD21O60216 631 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 CLTBP09497 229 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 TLE2Q04725 743 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 KCTD2Q14681 263 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms