RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TAF1CQ15572 869 aaPredicted RBP25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 PPP4R3BQ5MIZ7 849 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 GPAT2Q6NUI2 795 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 BLOC1S2Q6QNY1 142 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 RUFY3Q7L099 469 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 CEP95Q96GE4 821 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 CNNM2Q9H8M5 875 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 CYP46A1Q9Y6A2 500 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 A0A1W2PRG0 241 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 PABPC4Q13310 644 aaKnown RBP eCLIP25■■□□□ 1.593e-16■■■■□ 22.7
R3HDM4-204ENST00000589428 NKX2-3Q8TAU0 364 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 KRT23Q9C075 422 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 FOXN1O15353 648 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 RPS6KB1P23443 525 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 TRDNQ13061 729 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 TREML2Q5T2D2 321 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 NCOA7Q8NI08 942 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 C12orf42Q96LP6 360 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 EMILIN3Q9NT22 766 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 MTMR4Q9NYA4 1195 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 NYAP2Q9P242 653 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 TSKSQ9UJT2 592 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 SLC45A1Q9Y2W3 748 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 TMX2Q9Y320 296 aa25■■□□□ 1.59
R3HDM4-204ENST00000589428 TTLL1O95922 423 aa24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 CTCFP49711 727 aaPredicted RBP24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 SIAH1Q8IUQ4 282 aa24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 MB21D2Q8IYB1 491 aaPredicted RBP24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 TTC14Q96N46 770 aa24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 PARK7Q99497 189 aaKnown RBP24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 ZFYVE28Q9HCC9 887 aa24.99■■□□□ 1.59
R3HDM4-204ENST00000589428 HMGB1P09429 215 aaKnown RBP24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 CRHR2Q13324 411 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 RALYLQ86SE5 291 aaKnown RBP24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 TCEANC2Q96MN5 208 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 CFHR5Q9BXR6 569 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 GOPCQ9HD26 462 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 PNMA3Q9UL41 463 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 STX8Q9UNK0 236 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 B4E1Z4 1266 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 ST18O60284 1047 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 KDM4AO75164 1064 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 TBC1D8O95759 1140 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 VCPKMTQ9H867 229 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 CLIP2Q9UDT6 1046 aa24.98■■□□□ 1.59
R3HDM4-204ENST00000589428 VCAM1P19320 739 aa24.97■■□□□ 1.59
R3HDM4-204ENST00000589428 DHX32Q7L7V1 743 aaKnown RBP24.97■■□□□ 1.59
R3HDM4-204ENST00000589428 LPAR1Q92633 364 aa24.97■■□□□ 1.59
R3HDM4-204ENST00000589428 IQCA1Q86XH1 822 aa24.96■■□□□ 1.59
R3HDM4-204ENST00000589428 SNX21Q969T3 373 aa24.96■■□□□ 1.59
R3HDM4-204ENST00000589428 IL17RBQ9NRM6 502 aa24.96■■□□□ 1.59
R3HDM4-204ENST00000589428 PDRG1Q9NUG6 133 aa24.96■■□□□ 1.59
R3HDM4-204ENST00000589428 MYH4Q9Y623 1939 aa24.96■■□□□ 1.59
R3HDM4-204ENST00000589428 RAD21O60216 631 aa24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 NMT2O60551 498 aa24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 HSPA8P11142 646 aaKnown RBP24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 OSBPP22059 807 aa24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 ANTXR2P58335 489 aa24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 EXOSC10Q01780 885 aaKnown RBP24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 TCP11L1Q9NUJ3 509 aa24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 SYNPO2Q9UMS6 1093 aa24.95■■□□□ 1.59
R3HDM4-204ENST00000589428 IRX3P78415 501 aaPredicted RBP24.95■■□□□ 1.58
R3HDM4-204ENST00000589428 CYB5R4Q7L1T6 521 aa24.95■■□□□ 1.58
R3HDM4-204ENST00000589428 CHST3Q7LGC8 479 aa24.95■■□□□ 1.58
R3HDM4-204ENST00000589428 IL27Q8NEV9 243 aa24.95■■□□□ 1.58
R3HDM4-204ENST00000589428 SMCR8Q8TEV9 937 aaPredicted RBP24.95■■□□□ 1.58
R3HDM4-204ENST00000589428 CYP2C8P10632 490 aa24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 HOXA7P31268 230 aaPredicted RBP24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 MCM5P33992 734 aa24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 AK2P54819 239 aa24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 SPICE1Q8N0Z3 855 aa24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 LRRC47Q8N1G4 583 aaKnown RBP24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 MKL1Q969V6 931 aa24.94■■□□□ 1.58
R3HDM4-204ENST00000589428 PRC1O43663 620 aa24.93■■□□□ 1.58
R3HDM4-204ENST00000589428 CCDC178Q5BJE1 867 aa24.93■■□□□ 1.58
R3HDM4-204ENST00000589428 LRRC2Q9BYS8 371 aa24.93■■□□□ 1.58
R3HDM4-204ENST00000589428 RPAP3Q9H6T3 665 aaPredicted RBP24.93■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L15C9J2P7 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L13C9JLJ4 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L11C9JVI0 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L18D6R9N7 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L22D6RA61 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L17D6RBQ6 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L19D6RCP7 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L20D6RJB6 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 WDR46O15213 610 aaKnown RBP24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 TLR2O60603 784 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 USP17L24Q0WX57 530 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 ZKSCAN3Q9BRR0 538 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 UBAC1Q9BSL1 405 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 ASCC2Q9H1I8 757 aaPredicted RBP24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 R3HDMLQ9H3Y0 253 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 ZSWIM5Q9P217 1185 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 WDR19Q8NEZ3 1342 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 LBX1P52954 281 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 TANGO6Q9C0B7 1094 aa24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 ALDH8A1Q9H2A2 487 aaPredicted RBP24.92■■□□□ 1.58
R3HDM4-204ENST00000589428 F5H6K3 240 aa24.91■■□□□ 1.58
R3HDM4-204ENST00000589428 GPR25O00155 361 aa24.91■■□□□ 1.58
R3HDM4-204ENST00000589428 KLRC3Q07444 240 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms