RNA–Protein interactions for RNA: ENST00000588731.6

SUGP1-209, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-209ENST00000588731 V9GY48 417 aaPredicted RBP18.35■□□□□ 0.53
SUGP1-209ENST00000588731 TTLL1O95922 423 aa18.35■□□□□ 0.53
SUGP1-209ENST00000588731 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
SUGP1-209ENST00000588731 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
SUGP1-209ENST00000588731 USP17L2Q6R6M4 530 aa18.35■□□□□ 0.53
SUGP1-209ENST00000588731 DEFB129Q9H1M3 183 aa18.35■□□□□ 0.53
SUGP1-209ENST00000588731 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
SUGP1-209ENST00000588731 KIF3AQ9Y496 699 aa18.35■□□□□ 0.53
SUGP1-209ENST00000588731 GH2P01242 217 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 PKN1Q16512 942 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 PRAMEF18Q5VWM3 479 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 PIBF1Q8WXW3 757 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 SHISA4Q96DD7 197 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 RBM28Q9NW13 759 aaKnown RBP18.34■□□□□ 0.53
SUGP1-209ENST00000588731 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
SUGP1-209ENST00000588731 ANGEL2Q5VTE6 544 aaKnown RBP18.34■□□□□ 0.53
SUGP1-209ENST00000588731 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
SUGP1-209ENST00000588731 CYTH3O43739 400 aa18.33■□□□□ 0.53
SUGP1-209ENST00000588731 PDIA4P13667 645 aaKnown RBP18.33■□□□□ 0.53
SUGP1-209ENST00000588731 RESTQ13127 1097 aa18.33■□□□□ 0.53
SUGP1-209ENST00000588731 GRM4Q14833 912 aa18.33■□□□□ 0.53
SUGP1-209ENST00000588731 CNPY2Q9Y2B0 182 aa18.33■□□□□ 0.53
SUGP1-209ENST00000588731 STK36Q9NRP7 1315 aa18.33■□□□□ 0.52
SUGP1-209ENST00000588731 POLR2AP24928 1970 aaKnown RBP18.33■□□□□ 0.52
SUGP1-209ENST00000588731 PALM3A6NDB9 673 aaPredicted RBP18.33■□□□□ 0.52
SUGP1-209ENST00000588731 EEF2P13639 858 aaKnown RBP18.33■□□□□ 0.52
SUGP1-209ENST00000588731 TRIM22Q8IYM9 498 aa18.33■□□□□ 0.52
SUGP1-209ENST00000588731 RTN4Q9NQC3 1192 aaKnown RBP18.33■□□□□ 0.52
SUGP1-209ENST00000588731 GREB1LQ9C091 1923 aaPredicted RBP18.33■□□□□ 0.52
SUGP1-209ENST00000588731 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.52
SUGP1-209ENST00000588731 KRT40Q6A162 431 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 MAP3K14Q99558 947 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 RNF26Q9BY78 433 aaPredicted RBP18.32■□□□□ 0.52
SUGP1-209ENST00000588731 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
SUGP1-209ENST00000588731 DEXIO95424 95 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 PDHBP11177 359 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 KIF5BP33176 963 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 MAP3K10Q02779 954 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 NBPF12Q5TAG4 269 aaPredicted RBP18.32■□□□□ 0.52
SUGP1-209ENST00000588731 DLK2Q6UY11 383 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
SUGP1-209ENST00000588731 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 PRPF3O43395 683 aaKnown RBP18.31■□□□□ 0.52
SUGP1-209ENST00000588731 TBC1D12O60347 775 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 TNNI2P48788 182 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 TNFAIP1Q13829 316 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 TMEM179Q6ZVK1 233 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 TFIP11Q9UBB9 837 aaKnown RBP18.31■□□□□ 0.52
SUGP1-209ENST00000588731 KCNJ14Q9UNX9 436 aa18.31■□□□□ 0.52
SUGP1-209ENST00000588731 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
SUGP1-209ENST00000588731 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
SUGP1-209ENST00000588731 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
SUGP1-209ENST00000588731 ICA1Q05084 483 aa18.3■□□□□ 0.52
SUGP1-209ENST00000588731 FZD1Q9UP38 647 aa18.3■□□□□ 0.52
SUGP1-209ENST00000588731 FRMPD2Q68DX3 1309 aaPredicted RBP18.3■□□□□ 0.52
SUGP1-209ENST00000588731 PHF20L1A8MW92 1017 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
SUGP1-209ENST00000588731 SNHG28P0DPA3 235 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 MYH6P13533 1939 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
SUGP1-209ENST00000588731 MKL1Q969V6 931 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 VPS54Q9P1Q0 977 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 MYH4Q9Y623 1939 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
SUGP1-209ENST00000588731 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 FTOQ9C0B1 505 aaKnown RBP eCLIP18.29■□□□□ 0.52
SUGP1-209ENST00000588731 NYAP2Q9P242 653 aa18.29■□□□□ 0.52
SUGP1-209ENST00000588731 FIBPO43427 364 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 AKAP17AQ02040 695 aaKnown RBP18.28■□□□□ 0.52
SUGP1-209ENST00000588731 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
SUGP1-209ENST00000588731 ZSCAN16Q9H4T2 348 aaPredicted RBP18.28■□□□□ 0.52
SUGP1-209ENST00000588731 RAD21O60216 631 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 CAP2P40123 477 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 ECE1P42892 770 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 TTBK2Q6IQ55 1244 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 ZBTB21Q9ULJ3 1066 aa18.28■□□□□ 0.52
SUGP1-209ENST00000588731 GOLGA6L22H0YM25 854 aa18.27■□□□□ 0.52
SUGP1-209ENST00000588731 TRAK2O60296 914 aa18.27■□□□□ 0.52
SUGP1-209ENST00000588731 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.52
SUGP1-209ENST00000588731 KCTD1Q719H9 257 aa18.27■□□□□ 0.52
SUGP1-209ENST00000588731 WASF1Q92558 559 aa18.27■□□□□ 0.52
SUGP1-209ENST00000588731 VAT1LQ9HCJ6 419 aa18.27■□□□□ 0.52
SUGP1-209ENST00000588731 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.52
SUGP1-209ENST00000588731 BTBD18B2RXH4 712 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 GRIN3BO60391 1043 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
SUGP1-209ENST00000588731 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 SOCS7O14512 581 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 GNAQP50148 359 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 CEBPZQ03701 1054 aaKnown RBP18.26■□□□□ 0.51
SUGP1-209ENST00000588731 ZNF543Q08ER8 600 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms