RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	HAND2	P61296	217 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CTDSPL2	Q05D32	466 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	RALYL	Q86SE5	291 aa	Known RBP	11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	LRCH3	Q96II8	777 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PARK7	Q99497	189 aa	Known RBP	11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	MTA3	Q9BTC8	594 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CABP5	Q9NP86	173 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ZNF112	Q9UJU3	913 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987		A0A1W2PPC1	479 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CTNND1	O60716	968 aa	Known RBP	11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SLAIN1	Q8ND83	568 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	DYNLL2	Q96FJ2	89 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	NEK1	Q96PY6	1258 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TBC1D2	Q9BYX2	928 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TOMM22	Q9NS69	142 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TCP11L1	Q9NUJ3	509 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SNX14	Q9Y5W7	946 aa		11.16	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	DDX60L	Q5H9U9	1706 aa	Known RBP	11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	WDR19	Q8NEZ3	1342 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TSPY2	A6NKD2	308 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PHF20L1	A8MW92	1017 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	RANBP6	O60518	1105 aa	Known RBP	11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ASNS	P08243	561 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TSPY3	P0CV98	308 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TSPY8	P0CW00	308 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CYP2C8	P10632	490 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	MCM5	P33992	734 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SHMT1	P34896	483 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CAP2	P40123	477 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SART3	Q15020	963 aa	Known RBP	11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ABCB5	Q2M3G0	1257 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	IQCA1	Q86XH1	822 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TBC1D10C	Q8IV04	446 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	RASEF	Q8IZ41	740 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TMTC2	Q8N394	836 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TTC14	Q96N46	770 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TBC1D32	Q96NH3	1257 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	GABRQ	Q9UN88	632 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	KCNH4	Q9UQ05	1017 aa		11.15	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	MGAM	O43451	1857 aa		11.15	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	LAMA4	Q16363	1823 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ERICH2	A1L162	156 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ADCY3	O60266	1144 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	SGPL1	O95470	568 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	TFRC	P02786	760 aa	Known RBP	11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	INHA	P05111	366 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	BCR	P11274	1271 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ELN	P15502	786 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	RASA1	P20936	1047 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	TFAP4	Q01664	338 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	MOGS	Q13724	837 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	RRP12	Q5JTH9	1297 aa	Known RBP	11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	BLOC1S2	Q6QNY1	142 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	TMEM179	Q6ZVK1	233 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	DHX32	Q7L7V1	743 aa	Known RBP	11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	NEDD1	Q8NHV4	660 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	DEFB118	Q96PH6	123 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	NBPF3	Q9H094	633 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	DNAJC18	Q9H819	358 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	KANSL2	Q9H9L4	492 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ZSWIM6	Q9HCJ5	1215 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ZSWIM5	Q9P217	1185 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	CYP46A1	Q9Y6A2	500 aa		11.14	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	KDM4A	O75164	1064 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	FLT3LG	P49771	235 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	NOL9	Q5SY16	702 aa	Known RBP	11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	RUFY3	Q7L099	469 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	DGKH	Q86XP1	1220 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	SCYL3	Q8IZE3	742 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	STK11IP	Q8N1F8	1099 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	TMEM87B	Q96K49	555 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	JAKMIP1	Q96N16	626 aa	Known RBP	11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	UBAC1	Q9BSL1	405 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	AS3MT	Q9HBK9	375 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	PICK1	Q9NRD5	415 aa		11.13	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ALPK3	Q96L96	1907 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987		B4E1Z4	1266 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	MPHOSPH10	O00566	681 aa	Known RBP	11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	TNPO2	O14787	897 aa	Known RBP	11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	PRDM1	O75626	825 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	CAST	P20810	708 aa	Known RBP	11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	MNX1	P50219	401 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	RABEP1	Q15276	862 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ANKRD1	Q15327	319 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	GPAT2	Q6NUI2	795 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	GADL1	Q6ZQY3	521 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	STOX1	Q6ZVD7	989 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	C7orf61	Q8IZ16	206 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	FBXL16	Q8N461	479 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	SLC44A5	Q8NCS7	719 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	ANKS1A	Q92625	1134 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	INCENP	Q9NQS7	918 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	SYNPO2	Q9UMS6	1093 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	PLIN4	Q96Q06	1357 aa		11.12	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	NEDD4	P46934	1319 aa		11.11	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	MYH8	P13535	1937 aa		11.11	□□□□□ -0.63
U2AF1L4-208	ENST00000587987	USP17L5	A8MUK1	530 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms