RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SEPT2Q15019 361 aa13.87□□□□□ -0.19
TNFRSF11A-203ENST00000587697 CDC37L1Q7L3B6 337 aa13.87□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
TNFRSF11A-203ENST00000587697 PHF20L1A8MW92 1017 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 DEXIO95424 95 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 GH2P01242 217 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 EEF2P13639 858 aaKnown RBP13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 GNAQP50148 359 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 ICA1Q05084 483 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 RASGRP2Q7LDG7 609 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 TRIM22Q8IYM9 498 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 LRRC47Q8N1G4 583 aaKnown RBP13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SLC26A6Q9BXS9 759 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 ZBTB21Q9ULJ3 1066 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SYNPO2Q9UMS6 1093 aa13.86□□□□□ -0.19
TNFRSF11A-203ENST00000587697 BAG4O95429 457 aaKnown RBP13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 PDHBP11177 359 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 CAP2P40123 477 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 RESTQ13127 1097 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SLC35G1Q2M3R5 365 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 NBPF12Q5TAG4 269 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 FOXD4L5Q5VV16 416 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 MIGA2Q7L4E1 593 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 STAG2Q8N3U4 1231 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 FBXO18Q8NFZ0 1043 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 FOXD4L4Q8WXT5 416 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 WASF1Q92558 559 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 AIFM3Q96NN9 605 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 LZTS2Q9BRK4 669 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 ALG1Q9BT22 464 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 GINM1Q9NU53 330 aa13.85□□□□□ -0.19
TNFRSF11A-203ENST00000587697 LOC285556D6RIA3 1793 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 UBE2Q2LH0YL09 131 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 EPHX2P34913 555 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 PKN1Q16512 942 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 GMCL1P1Q8NEA9 526 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
TNFRSF11A-203ENST00000587697 IQCA1LA6NCM1 817 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 POTECB2RU33 542 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 H3BQV1 296 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 MCM4P33991 863 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 FOSBP53539 338 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ZNF341Q9BYN7 854 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 RLFQ13129 1914 aa13.83□□□□□ -0.2
TNFRSF11A-203ENST00000587697 TRPM7Q96QT4 1865 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 A0A1W2PRG0 241 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 CYTH3O43739 400 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ASNSP08243 561 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ATP2B2Q01814 1243 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 KRT40Q6A162 431 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 DCAF4Q8WV16 495 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 TAF1DQ9H5J8 278 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 GJB4Q9NTQ9 266 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ATP6V1DQ9Y5K8 247 aa13.82□□□□□ -0.2
TNFRSF11A-203ENST00000587697 COL11A1P12107 1806 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 AKAP17AQ02040 695 aaKnown RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 GUCY1B3Q02153 619 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 PFKFB3Q16875 520 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 DCPSQ96C86 337 aaKnown RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 CHAMP1Q96JM3 812 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 RIOX1Q9H6W3 641 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 MTMR7Q9Y216 660 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 TMX2Q9Y320 296 aa13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF11A-203ENST00000587697 DDX11L8A8MPP1 907 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms