RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CATSPERGQ6ZRH7 1159 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 CENPQQ7L2Z9 268 aaPredicted RBP17.61■□□□□ 0.41
ATG4D-207ENST00000587256 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
ATG4D-207ENST00000587256 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 MORF4L1Q9UBU8 362 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 ZMYM6O95789 1325 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 HTTP42858 3142 aa17.61■□□□□ 0.41
ATG4D-207ENST00000587256 SIAH1Q8IUQ4 282 aa17.6■□□□□ 0.41
ATG4D-207ENST00000587256 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
ATG4D-207ENST00000587256 COA7Q96BR5 231 aa17.6■□□□□ 0.41
ATG4D-207ENST00000587256 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
ATG4D-207ENST00000587256 TOMM22Q9NS69 142 aa17.6■□□□□ 0.41
ATG4D-207ENST00000587256 PLIN4Q96Q06 1357 aa17.6■□□□□ 0.41
ATG4D-207ENST00000587256 SPDYE16A6NNV3 312 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-207ENST00000587256 WDR46O15213 610 aaKnown RBP17.59■□□□□ 0.41
ATG4D-207ENST00000587256 PEX10O60683 326 aa17.59■□□□□ 0.41
ATG4D-207ENST00000587256 FGAP02671 866 aa17.59■□□□□ 0.41
ATG4D-207ENST00000587256 FAM47AQ5JRC9 791 aa17.59■□□□□ 0.41
ATG4D-207ENST00000587256 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
ATG4D-207ENST00000587256 ARMC5Q96C12 935 aa17.59■□□□□ 0.41
ATG4D-207ENST00000587256 CWC22Q9HCG8 908 aaKnown RBP17.59■□□□□ 0.41
ATG4D-207ENST00000587256 ANAPC4Q9UJX5 808 aa17.59■□□□□ 0.41
ATG4D-207ENST00000587256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
ATG4D-207ENST00000587256 TSPY2A6NKD2 308 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 FLOT1O75955 427 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 HAND2P61296 217 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 ERVK-24P63145 666 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 TFAP4Q01664 338 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
ATG4D-207ENST00000587256 NBPF11Q86T75 865 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 NEDD1Q8NHV4 660 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 SH3TC2Q8TF17 1288 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 NYAP2Q9P242 653 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 RBPJLQ9UBG7 517 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 RABGAP1Q9Y3P9 1069 aa17.58■□□□□ 0.4
ATG4D-207ENST00000587256 RAD50Q92878 1312 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 IGKV6D-41A0A0C4DH26 115 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
ATG4D-207ENST00000587256 FLT3LGP49771 235 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 CCNA1P78396 465 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
ATG4D-207ENST00000587256 TTLL1O95922 423 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 MYCP01106 439 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-207ENST00000587256 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-207ENST00000587256 MAPK4P31152 587 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 GRK4P32298 578 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 COG2Q14746 738 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 RRP12Q5JTH9 1297 aaKnown RBP17.56■□□□□ 0.4
ATG4D-207ENST00000587256 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 WDR78Q5VTH9 848 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 LBX2Q6XYB7 198 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
ATG4D-207ENST00000587256 ZNF333Q96JL9 665 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 MTMR4Q9NYA4 1195 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-207ENST00000587256 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
ATG4D-207ENST00000587256 A0A0G2JMZ2 1700 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 ORC4O43929 436 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 CNMDO75829 334 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 FAM83BQ5T0W9 1011 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 SLAIN1Q8ND83 568 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 RUFY2Q8WXA3 655 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 DSCC1Q9BVC3 393 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 PORCNQ9H237 461 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 HOXC10Q9NYD6 342 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 STX8Q9UNK0 236 aa17.55■□□□□ 0.4
ATG4D-207ENST00000587256 F5H6K3 240 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 ADCY3O60266 1144 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 NDUFB10O96000 172 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 KLRC3Q07444 240 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 Q3C1V9 767 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 POTEEQ6S8J3 1075 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 TBC1D10CQ8IV04 446 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-207ENST00000587256 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-207ENST00000587256 BTBD7Q9P203 1132 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
ATG4D-207ENST00000587256 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 TACC3Q9Y6A5 838 aa17.54■□□□□ 0.4
ATG4D-207ENST00000587256 ZNF213O14771 459 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 ELNP15502 786 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 CHMLP26374 656 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 DSG3P32926 999 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 IRF5Q13568 498 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 AKNAD1Q5T1N1 836 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 MB21D1Q8N884 522 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 SOCS4Q8WXH5 440 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 TMEM106CQ9BVX2 250 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 IL25Q9H293 177 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 FBXO28Q9NVF7 368 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms