RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-202ENST00000586396 CERS3Q8IU89 383 aa18.23■□□□□ 0.51
SF3A2-202ENST00000586396 NPLOC4Q8TAT6 608 aa18.23■□□□□ 0.51
SF3A2-202ENST00000586396 EHD4Q9H223 541 aa18.23■□□□□ 0.51
SF3A2-202ENST00000586396 RPAP3Q9H6T3 665 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-202ENST00000586396 PIH1D3Q9NQM4 214 aaKnown RBP18.23■□□□□ 0.51
SF3A2-202ENST00000586396 HMMRO75330 724 aa18.22■□□□□ 0.51
SF3A2-202ENST00000586396 TRPV1Q8NER1 839 aa18.22■□□□□ 0.51
SF3A2-202ENST00000586396 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
SF3A2-202ENST00000586396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.22■□□□□ 0.51
SF3A2-202ENST00000586396 CABP5Q9NP86 173 aa18.22■□□□□ 0.51
SF3A2-202ENST00000586396 TLR7Q9NYK1 1049 aaKnown RBP18.22■□□□□ 0.51
SF3A2-202ENST00000586396 TTC28Q96AY4 2481 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 MYCNP04198 464 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-202ENST00000586396 ADORA2AP29274 412 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 DPP9Q86TI2 863 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 ARRDC4Q8NCT1 418 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 MAFAQ8NHW3 353 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-202ENST00000586396 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 KIF1BPQ96EK5 621 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-202ENST00000586396 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
SF3A2-202ENST00000586396 SHHQ15465 462 aa18.2■□□□□ 0.5
SF3A2-202ENST00000586396 ANO1Q5XXA6 986 aa18.2■□□□□ 0.5
SF3A2-202ENST00000586396 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
SF3A2-202ENST00000586396 MAGEB6Q8N7X4 407 aa18.2■□□□□ 0.5
SF3A2-202ENST00000586396 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
SF3A2-202ENST00000586396 PARP14Q460N5 1801 aa18.2■□□□□ 0.5
SF3A2-202ENST00000586396 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
SF3A2-202ENST00000586396 C9orf50Q5SZB4 431 aa18.19■□□□□ 0.5
SF3A2-202ENST00000586396 OLFML2BQ68BL8 750 aa18.19■□□□□ 0.5
SF3A2-202ENST00000586396 SLC39A5Q6ZMH5 540 aa18.19■□□□□ 0.5
SF3A2-202ENST00000586396 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
SF3A2-202ENST00000586396 SHMT1P34896 483 aa18.18■□□□□ 0.5
SF3A2-202ENST00000586396 TRIM60Q495X7 471 aa18.18■□□□□ 0.5
SF3A2-202ENST00000586396 BADQ92934 168 aa18.18■□□□□ 0.5
SF3A2-202ENST00000586396 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
SF3A2-202ENST00000586396 PDLIM7Q9NR12 457 aa18.18■□□□□ 0.5
SF3A2-202ENST00000586396 COL11A1P12107 1806 aaPredicted RBP18.18■□□□□ 0.5
SF3A2-202ENST00000586396 PLXNA1Q9UIW2 1896 aa18.18■□□□□ 0.5
SF3A2-202ENST00000586396 MPHOSPH10O00566 681 aaKnown RBP18.17■□□□□ 0.5
SF3A2-202ENST00000586396 SEPT4O43236 478 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 STRNO43815 780 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
SF3A2-202ENST00000586396 SNX17Q15036 470 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 MYLIPQ8WY64 445 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 SPATC1LQ9H0A9 340 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
SF3A2-202ENST00000586396 SEMA6BQ9H3T3 888 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
SF3A2-202ENST00000586396 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
SF3A2-202ENST00000586396 IGHA2P01877 340 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 FOSL2P15408 326 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 ERCC3P19447 782 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 PLCD1P51178 756 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 MAP3K12Q12852 859 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 SEPT2Q15019 361 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 AACSQ86V21 672 aa18.16■□□□□ 0.5
SF3A2-202ENST00000586396 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
SF3A2-202ENST00000586396 POLR3DP05423 398 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-202ENST00000586396 GUCY1A2P33402 732 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 ADCYAP1R1P41586 468 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 PLS1Q14651 629 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 COG2Q14746 738 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 FAM47AQ5JRC9 791 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 SHCBP1Q8NEM2 672 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 FERMT2Q96AC1 680 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 TTYH1Q9H313 450 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-202ENST00000586396 HOXC10Q9NYD6 342 aa18.15■□□□□ 0.5
SF3A2-202ENST00000586396 LRRC41Q15345 812 aa18.14■□□□□ 0.49
SF3A2-202ENST00000586396 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
SF3A2-202ENST00000586396 MB21D1Q8N884 522 aa18.14■□□□□ 0.49
SF3A2-202ENST00000586396 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
SF3A2-202ENST00000586396 XIRP2A4UGR9 3374 aa18.14■□□□□ 0.49
SF3A2-202ENST00000586396 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 TRIM43BA6NCK2 446 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 COBLO75128 1261 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-202ENST00000586396 C1orf53Q5VUE5 145 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 SH3RF1Q7Z6J0 888 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 TRIM43Q96BQ3 446 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-202ENST00000586396 RNPC3Q96LT9 517 aaKnown RBP18.13■□□□□ 0.49
SF3A2-202ENST00000586396 MROH8Q9H579 483 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 SMCHD1A6NHR9 2005 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 CHD9Q3L8U1 2897 aa18.13■□□□□ 0.49
SF3A2-202ENST00000586396 BAZ2AQ9UIF9 1905 aaKnown RBP18.12■□□□□ 0.49
SF3A2-202ENST00000586396 FLOT1O75955 427 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 GABPAQ06546 454 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 PRAMEF19Q5SWL8 479 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 ABRAQ8N0Z2 381 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 MAML3Q96JK9 1138 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 RIOK1Q9BRS2 568 aaKnown RBP18.12■□□□□ 0.49
SF3A2-202ENST00000586396 CRNKL1Q9BZJ0 848 aaKnown RBP18.12■□□□□ 0.49
SF3A2-202ENST00000586396 IL1RAPL2Q9NP60 686 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 XPNPEP3Q9NQH7 507 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 MCM9Q9NXL9 1143 aa18.12■□□□□ 0.49
SF3A2-202ENST00000586396 MYH7P12883 1935 aa18.11■□□□□ 0.49
SF3A2-202ENST00000586396 TMEM265A0A087WTH1 108 aa18.11■□□□□ 0.49
SF3A2-202ENST00000586396 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms