RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TMEM47Q9BQJ4 181 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 PRPF3O43395 683 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 ADRA2BP18089 450 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 CCT6AP40227 531 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 SNW1Q13573 536 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 RASGRP2Q7LDG7 609 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 CACTINQ8WUQ7 758 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 POLLQ9UGP5 575 aa14.14□□□□□ -0.15
SMARCA4-208ENST00000585799 N4BP3O15049 544 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 PPP6R2O75170 966 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 C12orf60Q5U649 245 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 COA7Q96BR5 231 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 RXRBP28702 533 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 PIGSQ96S52 555 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 MROH7-TTC4A0A0A0MT08 1334 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 STRCQ7RTU9 1775 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 CLRN2A0PK11 232 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 ASIC1P78348 528 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 KARSQ15046 597 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 GPIHBP1Q8IV16 184 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
SMARCA4-208ENST00000585799 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 GNA11P29992 359 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 EVCP57679 992 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 GSDMDP57764 484 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 DDR1Q08345 913 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 OGFOD1Q8N543 542 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 MNS1Q8NEH6 495 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 TRIM47Q96LD4 638 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 SALL1Q9NSC2 1324 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 ABCC6O95255 1503 aa14.12□□□□□ -0.15
SMARCA4-208ENST00000585799 TCP10L2B9ZVM9 353 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 GDF11O95390 407 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 EN1Q05925 392 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 USH1GQ495M9 461 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 AXDND1Q5T1B0 1012 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 FUCA2Q9BTY2 467 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 RAD17O75943 681 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 SLURP2P0DP57 97 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 VEGFAP15692 232 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 SLC1A4P43007 532 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 TROAPQ12815 778 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 TMEM266Q2M3C6 531 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 ENGASEQ8NFI3 743 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 FEZ1Q99689 392 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 VPS16Q9H269 839 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 C21orf2O43822 256 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 ZNF500O60304 480 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 PCP11498 1178 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-208ENST00000585799 USP17L5A8MUK1 530 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 PTPREP23469 700 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 SNAP25P60880 206 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 SLC27A3Q5K4L6 730 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 NBPF11Q86T75 865 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 SERPINB13Q9UIV8 391 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 NPR1P16066 1061 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 SEC23AQ15436 765 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 FCHSD1Q86WN1 690 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 STK36Q9NRP7 1315 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 U2AF2P26368 475 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 TECP42680 631 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 RAD51AP2Q09MP3 1159 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 CEP135Q66GS9 1140 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 NUP88Q99567 741 aaPredicted RBP14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 TCEAL9Q9UHQ7 104 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 DAGLAQ9Y4D2 1042 aa14.1□□□□□ -0.15
SMARCA4-208ENST00000585799 URI1O94763 535 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 IPO7O95373 1038 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 RESP18Q5W5W9 173 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 REXO1Q8N1G1 1221 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 PP2D1A8MPX8 630 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 ORC4O43929 436 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 RBM6P78332 1123 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 ENOX2Q16206 610 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 DGKHQ86XP1 1220 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 MAN1B1Q9UKM7 699 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 COL14A1Q05707 1796 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 EARS2Q5JPH6 523 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 DYMQ7RTS9 669 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 ZNF384Q8TF68 577 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 COA1Q9GZY4 146 aa14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 SRPRBQ9Y5M8 271 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-208ENST00000585799 AKR1B1P15121 316 aa14.08□□□□□ -0.15
SMARCA4-208ENST00000585799 HMGB2P26583 209 aaKnown RBP14.08□□□□□ -0.15
SMARCA4-208ENST00000585799 MTIF2P46199 727 aaKnown RBP14.08□□□□□ -0.15
SMARCA4-208ENST00000585799 NEMFO60524 1076 aa14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 TOB1P50616 345 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 ADKP55263 362 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 IQCB1Q15051 598 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms