RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 A0A1W2PRG0 241 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 APBB1O00213 710 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 IGHA2P01877 340 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 ADD2P35612 726 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 WDR78Q5VTH9 848 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 HAUS7Q99871 368 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 SH2D4AQ9H788 454 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 PFASO15067 1338 aa18.11■□□□□ 0.49
VAPA-209ENST00000585042 NAV1Q8NEY1 1877 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 UBE3CQ15386 1083 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 ZSCAN25Q6NSZ9 544 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 BOLA2Q9H3K6 86 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 ARHGEF10LQ9HCE6 1279 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 SLC5A4Q9NY91 659 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 TMX2Q9Y320 296 aa18.1■□□□□ 0.49
VAPA-209ENST00000585042 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 C12orf60Q5U649 245 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 DPP9Q86TI2 863 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 ABRAQ8N0Z2 381 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 MOV10L1Q9BXT6 1211 aaKnown RBP18.09■□□□□ 0.49
VAPA-209ENST00000585042 SPATC1LQ9H0A9 340 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 MROH8Q9H579 483 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 ARMT1Q9H993 441 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
VAPA-209ENST00000585042 DDX20Q9UHI6 824 aaKnown RBP18.09■□□□□ 0.49
VAPA-209ENST00000585042 ZMYND8Q9ULU4 1186 aaPredicted RBP18.09■□□□□ 0.49
VAPA-209ENST00000585042 DSG3P32926 999 aa18.08■□□□□ 0.48
VAPA-209ENST00000585042 SIAH1Q8IUQ4 282 aa18.08■□□□□ 0.48
VAPA-209ENST00000585042 NPLOC4Q8TAT6 608 aa18.08■□□□□ 0.48
VAPA-209ENST00000585042 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.48
VAPA-209ENST00000585042 MBD4O95243 580 aa18.07■□□□□ 0.48
VAPA-209ENST00000585042 MAGEA10P43363 369 aaPredicted RBP18.07■□□□□ 0.48
VAPA-209ENST00000585042 CDK8P49336 464 aa18.07■□□□□ 0.48
VAPA-209ENST00000585042 LRRCC1Q9C099 1032 aa18.07■□□□□ 0.48
VAPA-209ENST00000585042 VCPKMTQ9H867 229 aa18.07■□□□□ 0.48
VAPA-209ENST00000585042 RCAN3Q9UKA8 241 aa18.07■□□□□ 0.48
VAPA-209ENST00000585042 USP17L12C9JPN9 530 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 USP17L21D6R901 530 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 DNM1LO00429 736 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 SOX1O00570 391 aaPredicted RBP18.06■□□□□ 0.48
VAPA-209ENST00000585042 WDR46O15213 610 aaKnown RBP18.06■□□□□ 0.48
VAPA-209ENST00000585042 PRKAB2O43741 272 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 CYP2D6P10635 497 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 SYN1P17600 705 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 ADORA2AP29274 412 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 EVX2Q03828 476 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 ICA1Q05084 483 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 C16orf86Q6ZW13 317 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 TDHQ8IZJ6 230 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 ARRDC4Q8NCT1 418 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 ADAMTS5Q9UNA0 930 aa18.06■□□□□ 0.48
VAPA-209ENST00000585042 ZNF236Q9UL36 1845 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 FLOT1O75955 427 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 SLC25A27O95847 323 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 CYBAP13498 195 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 AKR1B1P15121 316 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 ERCC3P19447 782 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 CNGA1P29973 690 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 CYP2C19P33261 490 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 KIAA1755Q5JYT7 1200 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 LRCH3Q96II8 777 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 UBE2OQ9C0C9 1292 aaKnown RBP18.05■□□□□ 0.48
VAPA-209ENST00000585042 RLFQ13129 1914 aa18.05■□□□□ 0.48
VAPA-209ENST00000585042 GIMAP6Q6P9H5 292 aa18.04■□□□□ 0.48
VAPA-209ENST00000585042 SENP6Q9GZR1 1112 aaPredicted RBP18.04■□□□□ 0.48
VAPA-209ENST00000585042 SLC4A4Q9Y6R1 1079 aa18.04■□□□□ 0.48
VAPA-209ENST00000585042 SEPT4O43236 478 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 FCER1AP12319 257 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 SBK1Q52WX2 424 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 CTR9Q6PD62 1173 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 TRPV1Q8NER1 839 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 ARPP21Q9UBL0 812 aaPredicted RBP18.03■□□□□ 0.48
VAPA-209ENST00000585042 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 MYH8P13535 1937 aa18.03■□□□□ 0.48
VAPA-209ENST00000585042 A0A0G2JMZ2 1700 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 COBLO75128 1261 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 EEF2P13639 858 aaKnown RBP18.02■□□□□ 0.48
VAPA-209ENST00000585042 PLS1Q14651 629 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 SLFNL1Q499Z3 407 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 NCAPG2Q86XI2 1143 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 SPICE1Q8N0Z3 855 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 ATG4CQ96DT6 458 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 PUS7LQ9H0K6 701 aaKnown RBP18.02■□□□□ 0.48
VAPA-209ENST00000585042 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 GOPCQ9HD26 462 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 LAMA3Q16787 3333 aa18.02■□□□□ 0.48
VAPA-209ENST00000585042 FRMPD3Q5JV73 1810 aa18.02■□□□□ 0.47
VAPA-209ENST00000585042 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.47
VAPA-209ENST00000585042 COPB2P35606 906 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms