RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ADORA2AP29274 412 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 SHMT1P34896 483 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 RTP1P59025 263 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 SEPT2Q15019 361 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 ZNF697Q5TEC3 545 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 TMEM179Q6ZVK1 233 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 SPATC1LQ9H0A9 340 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 MROH8Q9H579 483 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
CSNK1D-226ENST00000585026 LAMA3Q16787 3333 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 SEPT4O43236 478 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 CYBAP13498 195 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 GABPAQ06546 454 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 RIOK1Q9BRS2 568 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 ATP11BQ9Y2G3 1177 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 SIPA1L1O43166 1804 aa12.96□□□□□ -0.33
CSNK1D-226ENST00000585026 FLOT1O75955 427 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 ERCC3P19447 782 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 PLS1Q14651 629 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 SLC39A5Q6ZMH5 540 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.344e-6■■■□□ 14.8
CSNK1D-226ENST00000585026 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
CSNK1D-226ENST00000585026 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 SLC25A27O95847 323 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 FCER1AP12319 257 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 PDE6AP16499 860 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 DSG3P32926 999 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 TRPV1Q8NER1 839 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 EXOC6Q8TAG9 804 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 CCDC17Q96LX7 622 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 NRBP1Q9UHY1 535 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
CSNK1D-226ENST00000585026 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
CSNK1D-226ENST00000585026 IGHA2P01877 340 aa12.93□□□□□ -0.34
CSNK1D-226ENST00000585026 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-226ENST00000585026 ICA1Q05084 483 aa12.93□□□□□ -0.34
CSNK1D-226ENST00000585026 DCP1AQ9NPI6 582 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-226ENST00000585026 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
CSNK1D-226ENST00000585026 FOCADQ5VW36 1801 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 ZNF532Q9HCE3 1301 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 WDR46O15213 610 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 COBLO75128 1261 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 HMMRO75330 724 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 RARBP10826 455 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 COPB2P35606 906 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 C1orf53Q5VUE5 145 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 RNF180Q86T96 592 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 RHPN1Q8TCX5 695 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 PANK1Q8TE04 598 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 SDR42E1Q8WUS8 393 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 FAM161BQ96MY7 647 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.345e-10■□□□□ 9.7
CSNK1D-226ENST00000585026 VCPKMTQ9H867 229 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 ATP8A2Q9NTI2 1148 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
CSNK1D-226ENST00000585026 GOLIM4O00461 696 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 SMAD3P84022 425 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 KCTD2Q14681 263 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 SNX17Q15036 470 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 LRRC41Q15345 812 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 SHHQ15465 462 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 ANO1Q5XXA6 986 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 ATG4CQ96DT6 458 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 XPNPEP3Q9NQH7 507 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 MYH1P12882 1939 aa12.91□□□□□ -0.34
CSNK1D-226ENST00000585026 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 RPAP2Q8IXW5 612 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 SPICE1Q8N0Z3 855 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 LCORLQ8N3X6 602 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 BADQ92934 168 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 FERMT2Q96AC1 680 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 MMP19Q99542 508 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms