RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 CDK8P49336 464 aa15.94■□□□□ 0.14
SREBF1-223ENST00000584760 ZYXQ15942 572 aaKnown RBP15.94■□□□□ 0.14
SREBF1-223ENST00000584760 C7orf61Q8IZ16 206 aa15.94■□□□□ 0.14
SREBF1-223ENST00000584760 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.94■□□□□ 0.14
SREBF1-223ENST00000584760 A0A1W2PRG0 241 aa15.93■□□□□ 0.14
SREBF1-223ENST00000584760 VCAM1P19320 739 aa15.93■□□□□ 0.14
SREBF1-223ENST00000584760 USP14P54578 494 aa15.93■□□□□ 0.14
SREBF1-223ENST00000584760 IRX3P78415 501 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-223ENST00000584760 CLEC10AQ8IUN9 316 aa15.93■□□□□ 0.14
SREBF1-223ENST00000584760 CCDC17Q96LX7 622 aa15.93■□□□□ 0.14
SREBF1-223ENST00000584760 OSBPL3Q9H4L5 887 aa15.93■□□□□ 0.14
SREBF1-223ENST00000584760 ZMYND8Q9ULU4 1186 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-223ENST00000584760 PATL2C9JE40 543 aaKnown RBP15.92■□□□□ 0.14
SREBF1-223ENST00000584760 FOXP2O15409 715 aa15.92■□□□□ 0.14
SREBF1-223ENST00000584760 TDO2P48775 406 aa15.92■□□□□ 0.14
SREBF1-223ENST00000584760 HERVK_113P62684 666 aa15.92■□□□□ 0.14
SREBF1-223ENST00000584760 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
SREBF1-223ENST00000584760 GDF15Q99988 308 aa15.92■□□□□ 0.14
SREBF1-223ENST00000584760 MORF4L1Q9UBU8 362 aa15.92■□□□□ 0.14
SREBF1-223ENST00000584760 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
SREBF1-223ENST00000584760 ICA1Q05084 483 aa15.91■□□□□ 0.14
SREBF1-223ENST00000584760 CCDC129Q6ZRS4 1044 aa15.91■□□□□ 0.14
SREBF1-223ENST00000584760 TICAM2Q86XR7 235 aa15.91■□□□□ 0.14
SREBF1-223ENST00000584760 SIAH1Q8IUQ4 282 aa15.91■□□□□ 0.14
SREBF1-223ENST00000584760 IFNL3Q8IZI9 196 aa15.91■□□□□ 0.14
SREBF1-223ENST00000584760 P2RX7Q99572 595 aaKnown RBP15.91■□□□□ 0.14
SREBF1-223ENST00000584760 COL11A1P12107 1806 aaPredicted RBP15.91■□□□□ 0.14
SREBF1-223ENST00000584760 MINDY4BA8MYZ0 360 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 HMGCRP04035 888 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 APPP05067 770 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 SYN1P17600 705 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 RASA1P20936 1047 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 BMP8BP34820 402 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 TRIM32Q13049 653 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 DEFB123Q8N688 67 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 ANKLE1Q8NAG6 615 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.9■□□□□ 0.14
SREBF1-223ENST00000584760 NBPF3Q9H094 633 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 TXNRD2Q9NNW7 524 aa15.9■□□□□ 0.14
SREBF1-223ENST00000584760 HMX1Q9NP08 348 aaPredicted RBP15.9■□□□□ 0.14
SREBF1-223ENST00000584760 A0A0D9SFI3 127 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 PEX10O60683 326 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 Q7L0L9 218 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 GTF3C2Q8WUA4 911 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-223ENST00000584760 FAM227BQ96M60 508 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 NACAP1Q9BZK3 213 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 RPAP3Q9H6T3 665 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-223ENST00000584760 ARHGEF10LQ9HCE6 1279 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 GJD2Q9UKL4 321 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 RPTORQ8N122 1335 aa15.89■□□□□ 0.13
SREBF1-223ENST00000584760 KIAA1755Q5JYT7 1200 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 CATSPERGQ6ZRH7 1159 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 NAPBQ9H115 298 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 C11orf49Q9H6J7 331 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 KANSL2Q9H9L4 492 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 HELLSQ9NRZ9 838 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 RBPJLQ9UBG7 517 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 TMX2Q9Y320 296 aa15.88■□□□□ 0.13
SREBF1-223ENST00000584760 PLIN4Q96Q06 1357 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 TRIM6-TRIM34B2RNG4 842 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 EEF2P13639 858 aaKnown RBP15.87■□□□□ 0.13
SREBF1-223ENST00000584760 PDE4AP27815 886 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 MAGEA10P43363 369 aaPredicted RBP15.87■□□□□ 0.13
SREBF1-223ENST00000584760 ERVK-9P63128 1117 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 ERVK-24P63145 666 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 VPS53Q5VIR6 699 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 LBX2Q6XYB7 198 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 GPRC5AQ8NFJ5 357 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 LPAR1Q92633 364 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 SH2D4AQ9H788 454 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 VCPKMTQ9H867 229 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 ZNF236Q9UL36 1845 aa15.87■□□□□ 0.13
SREBF1-223ENST00000584760 IGKV6D-41A0A0C4DH26 115 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 SPDYE16A6NNV3 312 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-223ENST00000584760 CNMDO75829 334 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 CYP2B6P20813 491 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 MNX1P50219 401 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-223ENST00000584760 PPARAQ07869 468 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 NMIQ13287 307 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-223ENST00000584760 MCMDC2Q4G0Z9 681 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 GPR153Q6NV75 609 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 ZNF589Q86UQ0 364 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-223ENST00000584760 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 MKNK2Q9HBH9 465 aa15.86■□□□□ 0.13
SREBF1-223ENST00000584760 PRDM1O75626 825 aa15.85■□□□□ 0.13
SREBF1-223ENST00000584760 SPICE1Q8N0Z3 855 aa15.85■□□□□ 0.13
SREBF1-223ENST00000584760 TRIB2Q92519 343 aa15.85■□□□□ 0.13
SREBF1-223ENST00000584760 PAGR1Q9BTK6 254 aa15.85■□□□□ 0.13
SREBF1-223ENST00000584760 TANGO6Q9C0B7 1094 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms