RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 ASB2Q96Q27 587 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 PRDM12Q9H4Q4 367 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 XIRP2A4UGR9 3374 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 FOCADQ5VW36 1801 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 GRXCR1A8MXD5 290 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 PLCG2P16885 1265 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 PBX2P40425 430 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 ATXN2LQ8WWM7 1075 aaKnown RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 UHRF1Q96T88 793 aaPredicted RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 MEIS3Q99687 375 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
GGA3-219ENST00000584550 TMEM39AQ9NV64 488 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
GGA3-219ENST00000584550 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 REV3LO60673 3130 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 PGK1P00558 417 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 ERCC3P19447 782 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 USP14P54578 494 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 PPP4CP60510 307 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 PLS1Q14651 629 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 C1orf53Q5VUE5 145 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 CCDC129Q6ZRS4 1044 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 TMEM57Q8N5G2 664 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 NECAB3Q96P71 396 aaPredicted RBP12.46□□□□□ -0.41
GGA3-219ENST00000584550 XPNPEP3Q9NQH7 507 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 THEGQ9P2T0 379 aa12.46□□□□□ -0.41
GGA3-219ENST00000584550 PLXNA1Q9UIW2 1896 aa12.46□□□□□ -0.42
GGA3-219ENST00000584550 MYO5AQ9Y4I1 1855 aaKnown RBP12.46□□□□□ -0.42
GGA3-219ENST00000584550 KIAA0355O15063 1070 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 STRNO43815 780 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 IGFBP4P22692 258 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 MRPS5P82675 430 aaKnown RBP12.45□□□□□ -0.42
GGA3-219ENST00000584550 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
GGA3-219ENST00000584550 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
GGA3-219ENST00000584550 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 SPATC1LQ9H0A9 340 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 KIAA1683Q9H0B3 1180 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 PHF24Q9UPV7 400 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 MYH1P12882 1939 aa12.45□□□□□ -0.42
GGA3-219ENST00000584550 TCF20Q9UGU0 1960 aaKnown RBP12.44□□□□□ -0.42
GGA3-219ENST00000584550 A0A1W2PQ45 241 aaPredicted RBP12.44□□□□□ -0.42
GGA3-219ENST00000584550 A0A1W2PQY0 241 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
GGA3-219ENST00000584550 RARBP10826 455 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 USP5P45974 858 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 FAAP100Q0VG06 881 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 COG2Q14746 738 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 NCAPG2Q86XI2 1143 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 MIGA1Q8NAN2 632 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 SLC44A5Q8NCS7 719 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 LENG1Q96BZ8 264 aaPredicted RBP12.44□□□□□ -0.42
GGA3-219ENST00000584550 MAML3Q96JK9 1138 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.422e-7■■□□□ 14.2
GGA3-219ENST00000584550 PBX4Q9BYU1 374 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 TANGO6Q9C0B7 1094 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
GGA3-219ENST00000584550 BDP1A6H8Y1 2624 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 GNAI3P08754 354 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 RLBP1P12271 317 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 TAL1P17542 331 aaPredicted RBP12.43□□□□□ -0.42
GGA3-219ENST00000584550 CYP7A1P22680 504 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 ADGRE1Q14246 886 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 RNF180Q86T96 592 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 CABP5Q9NP86 173 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 SLC5A4Q9NY91 659 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 SERPINB13Q9UIV8 391 aa12.43□□□□□ -0.42
GGA3-219ENST00000584550 ZNFX1Q9P2E3 1918 aaKnown RBP12.43□□□□□ -0.42
GGA3-219ENST00000584550 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 TIMP1P01033 207 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 PGK2P07205 417 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 ACRP10323 421 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
GGA3-219ENST00000584550 SEPT2Q15019 361 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 C16orf59Q7L2K0 433 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
GGA3-219ENST00000584550 MYO9BQ13459 2157 aa12.42□□□□□ -0.42
GGA3-219ENST00000584550 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
GGA3-219ENST00000584550 FCER1AP12319 257 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
GGA3-219ENST00000584550 SHMT1P34896 483 aa12.41□□□□□ -0.42
GGA3-219ENST00000584550 ZAP70P43403 619 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 614.5 ms