RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PLIN4Q96Q06 1357 aa18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 PDE4DIPQ5VU43 2346 aa18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 FGRP09769 529 aa18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 HOXA7P31268 230 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 AKNAD1Q5T1N1 836 aa18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 RASEFQ8IZ41 740 aa18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 ZNF444Q8N0Y2 327 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 STAG1Q8WVM7 1258 aa18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 EMILIN3Q9NT22 766 aa18.87■□□□□ 0.61
CSNK1D-223ENST00000584472 E7EWF7 191 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 ORC4O43929 436 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 PRDM1O75626 825 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 CYP2C8P10632 490 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 PCP11498 1178 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 CAP1Q01518 475 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 TSGA10IPQ3SY00 556 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 STOX1Q6ZVD7 989 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 NBPF11Q86T75 865 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 TMX2Q9Y320 296 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 BRCA2P51587 3418 aa18.86■□□□□ 0.61
CSNK1D-223ENST00000584472 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 BCRP11274 1271 aa18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 OSBPP22059 807 aa18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 MFSD6Q6ZSS7 791 aa18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 CLEC10AQ8IUN9 316 aa18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 ASCC2Q9H1I8 757 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-223ENST00000584472 NEDD4P46934 1319 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 IGKV6D-41A0A0C4DH26 115 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 VCAM1P19320 739 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 HOXD10P28358 340 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 RBM25P49756 843 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 IRX3P78415 501 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 NEDD1Q8NHV4 660 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 LPAR1Q92633 364 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 ZNF333Q96JL9 665 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 NYAP2Q9P242 653 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 SYNPO2Q9UMS6 1093 aa18.84■□□□□ 0.61
CSNK1D-223ENST00000584472 TSPY3P0CV98 308 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 TSPY8P0CW00 308 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 GCLCP48506 637 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 NT5C2P49902 561 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 ANAPC15P60006 121 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 KRT32Q14532 448 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 PPP4R3BQ5MIZ7 849 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 VCPKMTQ9H867 229 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 CNNM2Q9H8M5 875 aa18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 MKI67P46013 3256 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 TFAP4Q01664 338 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 ADCK5Q3MIX3 580 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 RRP12Q5JTH9 1297 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 NKX2-3Q8TAU0 364 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 TBC1D32Q96NH3 1257 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 KRT23Q9C075 422 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 TOMM22Q9NS69 142 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 CPA4Q9UI42 421 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 PTCH2Q9Y6C5 1203 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
CSNK1D-223ENST00000584472 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 B4E1Z4 1266 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 ATP2B2Q01814 1243 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 TRDNQ13061 729 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 FAM47AQ5JRC9 791 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 NCOA7Q8NI08 942 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 GTF3C2Q8WUA4 911 aaPredicted RBP18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 SRRDQ9UH36 339 aa18.81■□□□□ 0.6
CSNK1D-223ENST00000584472 KIAA0100Q14667 2235 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 RANBP6O60518 1105 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 TTLL1O95922 423 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 PSMC4P43686 418 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 HERVK_113P62684 666 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 FAM110CQ1W6H9 321 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 CATSPERGQ6ZRH7 1159 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 ESR2Q92731 530 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 MKL1Q969V6 931 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 TRIM47Q96LD4 638 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms