RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 SYAP1Q96A49 352 aaPredicted RBP11.68□□□□□ -0.54
MKS1-212ENST00000583577 P2RX7Q99572 595 aaKnown RBP11.68□□□□□ -0.54
MKS1-212ENST00000583577 GZF1Q9H116 711 aaPredicted RBP11.68□□□□□ -0.54
MKS1-212ENST00000583577 PRDM12Q9H4Q4 367 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 RRAGDQ9NQL2 400 aaPredicted RBP11.68□□□□□ -0.54
MKS1-212ENST00000583577 LOC285556D6RIA3 1793 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 GBF1Q92538 1859 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 PDS5AQ29RF7 1337 aaKnown RBP11.67□□□□□ -0.54
MKS1-212ENST00000583577 FAM86C2PA6NEL3 165 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 PHF20L1A8MW92 1017 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 TPM2P07951 284 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 IGFBP4P22692 258 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
MKS1-212ENST00000583577 NFIAQ12857 509 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 SH3RF1Q7Z6J0 888 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 TRMT44Q8IYL2 757 aaKnown RBP11.67□□□□□ -0.54
MKS1-212ENST00000583577 ZGPATQ8N5A5 531 aaKnown RBP11.67□□□□□ -0.54
MKS1-212ENST00000583577 TIFAQ96CG3 184 aa11.67□□□□□ -0.54
MKS1-212ENST00000583577 DBNLQ9UJU6 430 aaKnown RBP11.67□□□□□ -0.54
MKS1-212ENST00000583577 MAST3O60307 1309 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
MKS1-212ENST00000583577 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
MKS1-212ENST00000583577 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
MKS1-212ENST00000583577 PEX10O60683 326 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 XRCC5P13010 732 aaKnown RBP11.66□□□□□ -0.54
MKS1-212ENST00000583577 BMP1P13497 986 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 CNGA1P29973 690 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 EPHB4P54760 987 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
MKS1-212ENST00000583577 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 MRIQ9BWK5 157 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
MKS1-212ENST00000583577 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
MKS1-212ENST00000583577 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 TRIM43BA6NCK2 446 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 CD2BP2O95400 341 aaKnown RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 LDHBP07195 334 aaKnown RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 SLURP2P0DP57 97 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 MX1P20591 662 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 MCAMP43121 646 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 TFF2Q03403 129 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 ADGRE1Q14246 886 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 TRIM60Q495X7 471 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 HHIPL2Q6UWX4 724 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 ZSCAN30Q86W11 494 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 SPATA5Q8NB90 893 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 TRIM43Q96BQ3 446 aaPredicted RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 GPATCH3Q96I76 525 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 ZNF512BQ96KM6 892 aaPredicted RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
MKS1-212ENST00000583577 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 ABCF2Q9UG63 623 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 SMCHD1A6NHR9 2005 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 USP34Q70CQ2 3546 aa11.65□□□□□ -0.54
MKS1-212ENST00000583577 DNM1LO00429 736 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
MKS1-212ENST00000583577 RGS2P41220 211 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 KCNQ1P51787 676 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.55
MKS1-212ENST00000583577 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
MKS1-212ENST00000583577 MICALL1Q8N3F8 863 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 LPAR1Q92633 364 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 ESYT1Q9BSJ8 1104 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 SNRKQ9NRH2 765 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 CXXC1Q9P0U4 656 aaPredicted RBP11.64□□□□□ -0.55
MKS1-212ENST00000583577 FAM198AQ9UFP1 575 aa11.64□□□□□ -0.55
MKS1-212ENST00000583577 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
MKS1-212ENST00000583577 PRDX5P30044 214 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 HMGCS2P54868 508 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 PI16Q6UXB8 463 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.63□□□□□ -0.55
MKS1-212ENST00000583577 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
MKS1-212ENST00000583577 ZSCAN29Q8IWY8 852 aaPredicted RBP11.63□□□□□ -0.55
MKS1-212ENST00000583577 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 FAM184AQ8NB25 1140 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
MKS1-212ENST00000583577 PANK2Q9BZ23 570 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 MORF4L1Q9UBU8 362 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 DDX20Q9UHI6 824 aaKnown RBP11.63□□□□□ -0.55
MKS1-212ENST00000583577 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 CDK5RAP2Q96SN8 1893 aa11.63□□□□□ -0.55
MKS1-212ENST00000583577 TRIOO75962 3097 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 RRP9O43818 475 aaKnown RBP11.62□□□□□ -0.55
MKS1-212ENST00000583577 CTNND1O60716 968 aaKnown RBP11.62□□□□□ -0.55
MKS1-212ENST00000583577 GPR37L1O60883 481 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 NCLP19338 710 aaKnown RBP11.62□□□□□ -0.55
MKS1-212ENST00000583577 ITGB8P26012 769 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms