RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 NMIQ13287 307 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-218ENST00000582671 COA7Q96BR5 231 aa22.36■■□□□ 1.17
LIMS2-218ENST00000582671 NAPBQ9H115 298 aa22.36■■□□□ 1.17
LIMS2-218ENST00000582671 KANSL2Q9H9L4 492 aa22.36■■□□□ 1.17
LIMS2-218ENST00000582671 MKNK2Q9HBH9 465 aa22.36■■□□□ 1.17
LIMS2-218ENST00000582671 SPDYE16A6NNV3 312 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-218ENST00000582671 ERVK-9P63128 1117 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 ERVK-24P63145 666 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 IRF5Q13568 498 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 MTFR1Q15390 333 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 SPICE1Q8N0Z3 855 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 GTF3C2Q8WUA4 911 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-218ENST00000582671 PORCNQ9H237 461 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 VCPKMTQ9H867 229 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 GJD2Q9UKL4 321 aa22.35■■□□□ 1.17
LIMS2-218ENST00000582671 ADCY3O60266 1144 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 ELNP15502 786 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 EN2P19622 333 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-218ENST00000582671 ATP2B2Q01814 1243 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 PPARAQ07869 468 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 MCMDC2Q4G0Z9 681 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 LBX2Q6XYB7 198 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 TICAM2Q86XR7 235 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 BTBD7Q9P203 1132 aa22.34■■□□□ 1.17
LIMS2-218ENST00000582671 SDSP20132 328 aa22.33■■□□□ 1.17
LIMS2-218ENST00000582671 ZNF589Q86UQ0 364 aaPredicted RBP22.33■■□□□ 1.17
LIMS2-218ENST00000582671 SLAIN1Q8ND83 568 aa22.33■■□□□ 1.17
LIMS2-218ENST00000582671 LPAR1Q92633 364 aa22.33■■□□□ 1.17
LIMS2-218ENST00000582671 TMEM106CQ9BVX2 250 aa22.33■■□□□ 1.17
LIMS2-218ENST00000582671 SH2D4AQ9H788 454 aa22.33■■□□□ 1.17
LIMS2-218ENST00000582671 RABGAP1Q9Y3P9 1069 aa22.33■■□□□ 1.17
LIMS2-218ENST00000582671 ZNFX1Q9P2E3 1918 aaKnown RBP22.32■■□□□ 1.16
LIMS2-218ENST00000582671 IGKV6D-41A0A0C4DH26 115 aa22.32■■□□□ 1.16
LIMS2-218ENST00000582671 COG2Q14746 738 aa22.32■■□□□ 1.16
LIMS2-218ENST00000582671 ZNF444Q8N0Y2 327 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-218ENST00000582671 PXYLP1Q8TE99 480 aa22.32■■□□□ 1.16
LIMS2-218ENST00000582671 TANGO6Q9C0B7 1094 aa22.32■■□□□ 1.16
LIMS2-218ENST00000582671 TACC3Q9Y6A5 838 aa22.32■■□□□ 1.16
LIMS2-218ENST00000582671 CTDSPL2Q05D32 466 aa22.31■■□□□ 1.16
LIMS2-218ENST00000582671 INCENPQ9NQS7 918 aa22.31■■□□□ 1.16
LIMS2-218ENST00000582671 LAMA4Q16363 1823 aa22.31■■□□□ 1.16
LIMS2-218ENST00000582671 ZNF287Q9HBT7 754 aa22.3■■□□□ 1.16
LIMS2-218ENST00000582671 NYAP2Q9P242 653 aa22.3■■□□□ 1.16
LIMS2-218ENST00000582671 BIN2Q9UBW5 565 aaPredicted RBP22.3■■□□□ 1.16
LIMS2-218ENST00000582671 WDR46O15213 610 aaKnown RBP22.29■■□□□ 1.16
LIMS2-218ENST00000582671 INHAP05111 366 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 HSPD1P10809 573 aaKnown RBP22.29■■□□□ 1.16
LIMS2-218ENST00000582671 CCL5P13501 91 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 MAPK4P31152 587 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 DSG3P32926 999 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 PDE4BQ07343 736 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 ALX1Q15699 326 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 FAM47AQ5JRC9 791 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 GPR142Q7Z601 462 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 CEP95Q96GE4 821 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 HOXC10Q9NYD6 342 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.29■■□□□ 1.16
LIMS2-218ENST00000582671 CCDC171Q6TFL3 1326 aa22.29■■□□□ 1.16
LIMS2-218ENST00000582671 PLIN4Q96Q06 1357 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 FLOT1O75955 427 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 FGAP02671 866 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 SLC3A2P08195 630 aaKnown RBP22.28■■□□□ 1.16
LIMS2-218ENST00000582671 CYP2B6P20813 491 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 UBXN2AP68543 259 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 NEDD1Q8NHV4 660 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 GOPCQ9HD26 462 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 ANAPC4Q9UJX5 808 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 BRCA2P51587 3418 aa22.28■■□□□ 1.16
LIMS2-218ENST00000582671 TNRC18O15417 2968 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-218ENST00000582671 RAD21O60216 631 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 TFAP4Q01664 338 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 MORN1Q5T089 497 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 PLEKHH3Q7Z736 793 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 USP6NLQ92738 828 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 ATG4CQ96DT6 458 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 NUDT12Q9BQG2 462 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 FBXO28Q9NVF7 368 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 MTMR4Q9NYA4 1195 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 CLIP2Q9UDT6 1046 aa22.27■■□□□ 1.16
LIMS2-218ENST00000582671 F5H6K3 240 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 TSPY3P0CV98 308 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 TSPY8P0CW00 308 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 GSPT1P15170 499 aaKnown RBP22.26■■□□□ 1.15
LIMS2-218ENST00000582671 CCNA1P78396 465 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 KLRC3Q07444 240 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 TRIM32Q13049 653 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 FAM83BQ5T0W9 1011 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 TTC22Q5TAA0 569 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 CWC27Q6UX04 472 aaKnown RBP22.26■■□□□ 1.15
LIMS2-218ENST00000582671 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
LIMS2-218ENST00000582671 TRIB2Q92519 343 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 MKL1Q969V6 931 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 SHISA4Q96DD7 197 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 NUP88Q99567 741 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-218ENST00000582671 RNF208Q9H0X6 261 aa22.26■■□□□ 1.15
LIMS2-218ENST00000582671 PDE4DIPQ5VU43 2346 aa22.25■■□□□ 1.15
LIMS2-218ENST00000582671 ZNF236Q9UL36 1845 aa22.25■■□□□ 1.15
LIMS2-218ENST00000582671 NDUFB10O96000 172 aa22.25■■□□□ 1.15
LIMS2-218ENST00000582671 SAMD1Q6SPF0 538 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms