RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 MYH7P12883 1935 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 REV3LO60673 3130 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TRIM43BA6NCK2 446 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 C19orf81C9J6K1 198 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SMARCA5O60264 1052 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PEX10O60683 326 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ZFYP08048 801 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 HOXC6P09630 235 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 BTDP43251 543 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CCNA1P78396 465 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 Q3C1V9 767 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TTC22Q5TAA0 569 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SPTY2D1Q68D10 685 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 DZIP1Q86YF9 867 aaKnown RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CERS3Q8IU89 383 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PPM1EQ8WY54 764 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TRIM43Q96BQ3 446 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 HAUS7Q99871 368 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PAGR1Q9BTK6 254 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CCDC8Q9H0W5 538 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TACC3Q9Y6A5 838 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CHD9Q3L8U1 2897 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 LRRC37A2A6NM11 1700 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SLC15A5A6NIM6 579 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 MAP4K4O95819 1239 aaPredicted RBP10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ASNSP08243 561 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ATP2B2Q01814 1243 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 POTEEQ6S8J3 1075 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SH3RF1Q7Z6J0 888 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 FLRT1Q9NZU1 646 aa10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 HERC5Q9UII4 1024 aaKnown RBP10.48□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ZNFX1Q9P2E3 1918 aaKnown RBP10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SMCHD1A6NHR9 2005 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CLTBP09497 229 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CYBAP13498 195 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 EPHB4P54760 987 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 RHBDL3P58872 404 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 FPGSQ05932 587 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 GRB14Q14449 540 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SPATA5Q8NB90 893 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PI4K2BQ8TCG2 481 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 LRFN3Q9BTN0 628 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 RABGAP1Q9Y3P9 1069 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 IVNS1ABPQ9Y6Y0 642 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 A0A0G2JMZ2 1700 aa10.47□□□□□ -0.73
PDLIM1P3-201ENST00000582370 GPR75-ASB3A0A0A6YYF3 556 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 KIAA0355O15063 1070 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SEPT4O43236 478 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 EPB41L2O43491 1005 aaKnown RBP10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 IGHA2P01877 340 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 RAG1P15918 1043 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PTPREP23469 700 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ITGB8P26012 769 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PDE4AP27815 886 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CYP2C19P33261 490 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TLE2Q04725 743 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 RRP1BQ14684 758 aaKnown RBP10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TRPV1Q8NER1 839 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 GINM1Q9NU53 330 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PAG1Q9NWQ8 432 aa10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CXXC1Q9P0U4 656 aaPredicted RBP10.46□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CHD7Q9P2D1 2997 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ADCYAP1R1P41586 468 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 GSTO1P78417 241 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 AAK1Q2M2I8 961 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TMEM31Q5JXX7 168 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 OLFML2BQ68BL8 750 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 KBTBD3Q8NAB2 608 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 NPLOC4Q8TAT6 608 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 SNX27Q96L92 541 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ABCF2Q9UG63 623 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MYH1P12882 1939 aa10.45□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RAD50Q92878 1312 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CDC45O75419 566 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CNMDO75829 334 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 BMP1P13497 986 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ADORA1P30542 326 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PHKA1P46020 1223 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 LRRC41Q15345 812 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CCDC174Q6PII3 467 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 NECAB3Q96P71 396 aaPredicted RBP10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PBX4Q9BYU1 374 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 BOLA2Q9H3K6 86 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TLR7Q9NYK1 1049 aaKnown RBP10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PI4KBQ9UBF8 816 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TRANK1O15050 2925 aa10.44□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms