RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MFSD6Q6ZSS7 791 aa15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 STK11IPQ8N1F8 1099 aa15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 SNX21Q969T3 373 aa15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 CNNM2Q9H8M5 875 aa15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 ZCCHC17Q9NP64 241 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 TOMM22Q9NS69 142 aa15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 ZHX2Q9Y6X8 837 aa15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 GREB1LQ9C091 1923 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-220ENST00000581737 PLIN4Q96Q06 1357 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 SOX1O00570 391 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 CXCL11O14625 94 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 ST18O60284 1047 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 FGRP09769 529 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 CCL5P13501 91 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 AKR1B1P15121 316 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 TBC1D10CQ8IV04 446 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 WDR18Q9BV38 432 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 USP26Q9BXU7 913 aa15.89■□□□□ 0.13
CSNK1D-220ENST00000581737 PTPRFP10586 1907 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 PDHXO00330 501 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 PRDM1O75626 825 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 GNRH1P01148 92 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 TSPY3P0CV98 308 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 TSPY8P0CW00 308 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 GJA8P48165 433 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 TRDNQ13061 729 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 RAB3GAP1Q15042 981 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 ESR2Q92731 530 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 KRT23Q9C075 422 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 SH2D4AQ9H788 454 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 KANSL2Q9H9L4 492 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 KCNH4Q9UQ05 1017 aa15.88■□□□□ 0.13
CSNK1D-220ENST00000581737 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 CYP21A2P08686 494 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 GRK4P32298 578 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 PRMT2P55345 433 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 ICA1Q05084 483 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 PRKCZQ05513 592 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 SEPT2Q15019 361 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 RRP12Q5JTH9 1297 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 FEZ1Q99689 392 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 ARHGEF10LQ9HCE6 1279 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 GABRQQ9UN88 632 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 AFG3L2Q9Y4W6 797 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 MYPNQ86TC9 1320 aa15.87■□□□□ 0.13
CSNK1D-220ENST00000581737 TRIM75PA6NK02 468 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 DLL1O00548 723 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 FMNL1O95466 1100 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 GJB1P08034 283 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 CYP2C8P10632 490 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 JAG1P78504 1218 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 TFAP4Q01664 338 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 SPP2Q13103 211 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 SHROOM1Q2M3G4 852 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 GPAT2Q6NUI2 795 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 RALYLQ86SE5 291 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 ANKRD23Q86SG2 305 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 NEDD1Q8NHV4 660 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 RAET1EQ8TD07 263 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 RNF208Q9H0X6 261 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
CSNK1D-220ENST00000581737 LOC285556D6RIA3 1793 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 C19orf81C9J6K1 198 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 SLC27A2O14975 620 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 BCRP11274 1271 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 GUCY1A2P33402 732 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 MCM2P49736 904 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 USP14P54578 494 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 NECTIN1Q15223 517 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 CCDC178Q5BJE1 867 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 FASTKD5Q7L8L6 764 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 CCDC84Q86UT8 332 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 U2AF1L4Q8WU68 220 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 LRCH3Q96II8 777 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 MYH4Q9Y623 1939 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 NEDD4P46934 1319 aa15.85■□□□□ 0.13
CSNK1D-220ENST00000581737 A0A0G2JLL6 359 aaPredicted RBP15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 BACE1P56817 501 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 KRT32Q14532 448 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 FAM47AQ5JRC9 791 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 PRRT2Q7Z6L0 340 aaPredicted RBP15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 IQCA1Q86XH1 822 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 SLC17A8Q8NDX2 589 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 NCOA7Q8NI08 942 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 KIAA1683Q9H0B3 1180 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 TMOD4Q9NZQ9 345 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 SYNPO2Q9UMS6 1093 aa15.84■□□□□ 0.13
CSNK1D-220ENST00000581737 IGKV6D-41A0A0C4DH26 115 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 E7EWF7 191 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 TTLL1O95922 423 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 ATP2B2Q01814 1243 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 MTMR2Q13614 643 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms