RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 ACRBPQ8NEB7 543 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 CCDC148Q8NFR7 591 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 NUP88Q99567 741 aaPredicted RBP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MED4Q9NPJ6 270 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MYO6Q9UM54 1294 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MYO5AQ9Y4I1 1855 aaKnown RBP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 COL18A1P39060 1754 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 N4BP1O75113 896 aaKnown RBP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MBD4O95243 580 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 PDE8BO95263 885 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MCM3P25205 808 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 ARID4AP29374 1257 aaPredicted RBP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 CCT6AP40227 531 aaKnown RBP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 PHKA1P46020 1223 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 TDO2P48775 406 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 SPAG1Q07617 926 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MAGEB6Q8N7X4 407 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 FANCBQ8NB91 859 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 TTLL11Q8NHH1 800 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 CABLES1Q8TDN4 633 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 OXER1Q8TDS5 423 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 FERMT2Q96AC1 680 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 EPSTI1Q96J88 318 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
RIOK3-204ENST00000581220 RSPH14Q9UHP6 348 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 LCMT1Q9UIC8 334 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 BRWD3Q6RI45 1802 aa9.64□□□□□ -0.87
RIOK3-204ENST00000581220 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 PPP1R3GB7ZBB8 358 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 TRIM66O15016 1216 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 RPS6KA5O75582 802 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 FECHP22830 423 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 RCAN1P53805 252 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 DPYDQ12882 1025 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 WWC2Q6AWC2 1192 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 SH3RF1Q7Z6J0 888 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 CMTR1Q8N1G2 835 aaKnown RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 STAG1Q8WVM7 1258 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 MTA3Q9BTC8 594 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 RNF41Q9H4P4 317 aaPredicted RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 GREM2Q9H772 168 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 ARMT1Q9H993 441 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 SUGCTQ9HAC7 445 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 EPB41L4AQ9HCS5 686 aaPredicted RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 ABHD10Q9NUJ1 306 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 CTNND2Q9UQB3 1225 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 CDHR2Q9BYE9 1310 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 GNAT2P19087 354 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 KRT2P35908 639 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 MAP9Q49MG5 647 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 SMYD4Q8IYR2 804 aaPredicted RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 ZNF654Q8IZM8 581 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 CTCFLQ8NI51 663 aaPredicted RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 UBAC1Q9BSL1 405 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 RNF26Q9BY78 433 aaPredicted RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 VPS16Q9H269 839 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 EFCC1Q9HA90 598 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 BRMS1Q9HCU9 246 aa9.63□□□□□ -0.87
RIOK3-204ENST00000581220 LIMA1Q9UHB6 759 aaKnown RBP9.63□□□□□ -0.87
RIOK3-204ENST00000581220 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 MYH6P13533 1939 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 A0A087X0B3 334 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 PHACTR2O75167 634 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 CASP1P29466 404 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 CTSWP56202 376 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 ERVK-24P63145 666 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 PPP2R5BQ15173 497 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 KRT31Q15323 416 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 RRAGBQ5VZM2 374 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 WDR93Q6P2C0 686 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 IPO4Q8TEX9 1081 aaKnown RBP9.62□□□□□ -0.87
RIOK3-204ENST00000581220 LPIN2Q92539 896 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 SLF1Q9BQI6 1058 aa9.62□□□□□ -0.87
RIOK3-204ENST00000581220 TNS1Q9HBL0 1735 aaKnown RBP9.62□□□□□ -0.87
RIOK3-204ENST00000581220 LRRC10BA6NIK2 292 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 KRT9P35527 623 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 COPB1P53618 953 aaKnown RBP9.61□□□□□ -0.87
RIOK3-204ENST00000581220 PUM3Q15397 648 aaKnown RBP9.61□□□□□ -0.87
RIOK3-204ENST00000581220 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
RIOK3-204ENST00000581220 CTR9Q6PD62 1173 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 VGLL2Q8N8G2 317 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 ZBTB9Q96C00 473 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 PYM1Q9BRP8 204 aaKnown RBP9.61□□□□□ -0.87
RIOK3-204ENST00000581220 VIPAS39Q9H9C1 493 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 RWDD2AQ9UIY3 292 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 RTL9Q8NET4 1388 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 ATF3P18847 181 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 GPTP24298 496 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 ARHGAP25P42331 645 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 PAK1Q13153 545 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 NCAPH2Q6IBW4 605 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
RIOK3-204ENST00000581220 NOA1Q8NC60 698 aaKnown RBP9.61□□□□□ -0.87
RIOK3-204ENST00000581220 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms