RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 LRRC47Q8N1G4 583 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PI4KBQ9UBF8 816 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 DICER1Q9UPY3 1922 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-218ENST00000580391 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
CDK5RAP3-218ENST00000580391 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PALM3A6NDB9 673 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 MPHOSPH10O00566 681 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 NR5A1Q13285 461 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SAFBQ15424 915 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 POLR3EQ9NVU0 708 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SCG2P13521 617 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 NASPP49321 788 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 NOSTRINQ8IVI9 506 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PHF20Q9BVI0 1012 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CYTH3O43739 400 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 YEATS4O95619 227 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 XBP1P17861 261 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CNTNAP1P78357 1384 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 STK38Q15208 465 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ANO1Q5XXA6 986 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SBF1O95248 1867 aa17.12■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GNAQP50148 359 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CSRNP1Q96S65 589 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 FOXP1Q9H334 677 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TTLL1O95922 423 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PARP1P09874 1014 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PDHBP11177 359 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ME1P48163 572 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 NPY5RQ15761 445 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 LRSAM1Q6UWE0 723 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 MTMR14Q8NCE2 650 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 VEZTQ9HBM0 779 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CLIP2Q9UDT6 1046 aa17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-218ENST00000580391 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SF3A1Q15459 793 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CERKLQ49MI3 558 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TATDN1Q6P1N9 297 aa17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 METTL16Q86W50 562 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 FRMPD2Q68DX3 1309 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-218ENST00000580391 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GDF11O95390 407 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 KRT2P35908 639 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 L1TD1Q5T7N2 865 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 FOXP4Q8IVH2 680 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 KCNG4Q8TDN1 519 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GOLPH3LQ9H4A5 285 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ATAD5Q96QE3 1844 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SPTLC2O15270 562 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 NR1I2O75469 434 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TNIP1Q15025 636 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 FAM151AQ8WW52 585 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SPZ1Q9BXG8 430 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 MYOZ2Q9NPC6 264 aa17.09■□□□□ 0.33
CDK5RAP3-218ENST00000580391 WNT10BO00744 389 aa17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 SNHG28P0DPA3 235 aa17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TOB1P50616 345 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 PTPAQ15257 358 aa17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 EARS2Q5JPH6 523 aaKnown RBP17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 TYW1BQ6NUM6 668 aa17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.33
CDK5RAP3-218ENST00000580391 ADAMTS3O15072 1205 aa17.08■□□□□ 0.32
CDK5RAP3-218ENST00000580391 EGFRP00533 1210 aa17.08■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RRP1BQ14684 758 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SEPT2Q15019 361 aa17.08■□□□□ 0.32
CDK5RAP3-218ENST00000580391 WWC2Q6AWC2 1192 aa17.08■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ZNF541Q9H0D2 1346 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 XRCC6P12956 609 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms