RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-209ENST00000580095 BRIP1Q9BX63 1249 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 CEP131Q9UPN4 1083 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 ZNF18P17022 549 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-209ENST00000580095 IL17AQ16552 155 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 TRIM65Q6PJ69 517 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 REXO1L1PQ8IX06 675 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 WDR24Q96S15 920 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 BAG1Q99933 345 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-209ENST00000580095 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
TOP3A-209ENST00000580095 ANKIB1Q9P2G1 1089 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
TOP3A-209ENST00000580095 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 CCT6AP40227 531 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 ETF1P62495 437 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 DZIP1Q86YF9 867 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 NID2Q14112 1375 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 PP2D1A8MPX8 630 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 GOLGA8HP0CJ92 632 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 TFAP4Q01664 338 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 NFIXQ14938 502 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 SPECC1LQ69YQ0 1117 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 SOWAHDA6NJG2 315 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 ZPR1O75312 459 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 SLFN14P0C7P3 912 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 RCSD1Q6JBY9 416 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 ERO1AQ96HE7 468 aa11.93□□□□□ -0.5
TOP3A-209ENST00000580095 CGNQ9P2M7 1197 aaKnown RBP11.93□□□□□ -0.5
TOP3A-209ENST00000580095 PLCD1P51178 756 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 GNG11P61952 73 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-209ENST00000580095 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 SH3RF3Q8TEJ3 882 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-209ENST00000580095 TNFRSF25Q93038 417 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 MTRQ99707 1265 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
TOP3A-209ENST00000580095 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
TOP3A-209ENST00000580095 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
TOP3A-209ENST00000580095 FAM205AQ6ZU69 1335 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 UBAP1LF5GYI3 381 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 SCG2P13521 617 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 USP5P45974 858 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 CUL4BQ13620 913 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
TOP3A-209ENST00000580095 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 CARD6Q9BX69 1037 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 BRMS1Q9HCU9 246 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 LZTFL1Q9NQ48 299 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 IL17RBQ9NRM6 502 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 ZNF446Q9NWS9 450 aa11.92□□□□□ -0.5
TOP3A-209ENST00000580095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.57e-6■■■■□ 21
TOP3A-209ENST00000580095 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 ZSWIM4Q9H7M6 989 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 XDHP47989 1333 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 CHD4Q14839 1912 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 DOCK2Q92608 1830 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 RBL2Q08999 1139 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 TBX2Q13207 712 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-209ENST00000580095 SPATA20Q8TB22 786 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 TGFBRAP1Q8WUH2 860 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 L2HGDHQ9H9P8 463 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
TOP3A-209ENST00000580095 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 CCDC93Q567U6 631 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 MAPKAPK5Q8IW41 473 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 ZNF397Q8NF99 534 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-209ENST00000580095 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
TOP3A-209ENST00000580095 KAT14Q9H8E8 782 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 MRPL44Q9H9J2 332 aaKnown RBP11.9□□□□□ -0.5
TOP3A-209ENST00000580095 RBM28Q9NW13 759 aaKnown RBP11.9□□□□□ -0.5
TOP3A-209ENST00000580095 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 CACNA1SQ13698 1873 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
TOP3A-209ENST00000580095 NR1I3Q14994 352 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 APTXQ7Z2E3 356 aaKnown RBP11.9□□□□□ -0.5
TOP3A-209ENST00000580095 IGSF22Q8N9C0 903 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 VPS16Q9H269 839 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.5
TOP3A-209ENST00000580095 DACH1Q9UI36 760 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms