RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 NT5DC1Q5TFE4 455 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 USPL1Q5W0Q7 1092 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 PCED1AQ9H1Q7 454 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 DUSP15Q9H1R2 295 aaPredicted RBP4.79□□□□□ -1.64
KPNB1-208ENST00000580019 NPHS2Q9NP85 383 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 TRAK1Q9UPV9 953 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 USTQ9Y2C2 406 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 ABLIM1O14639 778 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 FZD6O60353 706 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 NEFLP07196 543 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 NME2P22392 152 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 ATP2B4P23634 1241 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 CAP2P40123 477 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 YBX1P67809 324 aaKnown RBP4.78□□□□□ -1.64
KPNB1-208ENST00000580019 SLBPQ14493 270 aaKnown RBP eCLIP4.78□□□□□ -1.64
KPNB1-208ENST00000580019 NLRX1Q86UT6 975 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 IGDCC3Q8IVU1 814 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 SIRT2Q8IXJ6 389 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 PBXIP1Q96AQ6 731 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 GPATCH2Q9NW75 528 aa4.78□□□□□ -1.64
KPNB1-208ENST00000580019 LTKP29376 864 aa4.77□□□□□ -1.65
KPNB1-208ENST00000580019 TMEM164Q5U3C3 297 aa4.77□□□□□ -1.65
KPNB1-208ENST00000580019 SAMD11Q96NU1 681 aa4.77□□□□□ -1.65
KPNB1-208ENST00000580019 RBM15Q96T37 977 aaKnown RBP eCLIP4.77□□□□□ -1.65
KPNB1-208ENST00000580019 CBX8Q9HC52 389 aa4.77□□□□□ -1.65
KPNB1-208ENST00000580019 FAM13AO94988 1023 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 NPR3P17342 541 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 DTHD1Q6ZMT9 781 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 LDHDQ86WU2 507 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 ZNF575Q86XF7 245 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 NLGN1Q8N2Q7 840 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 GTF3C2Q8WUA4 911 aaPredicted RBP4.76□□□□□ -1.65
KPNB1-208ENST00000580019 NAF1Q96HR8 494 aaKnown RBP4.76□□□□□ -1.65
KPNB1-208ENST00000580019 LOXL4Q96JB6 756 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 FBRSQ9HAH7 460 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 CRTAC1Q9NQ79 661 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 PCDHA11Q9Y5I1 949 aa4.76□□□□□ -1.65
KPNB1-208ENST00000580019 CNR2P34972 360 aa4.75□□□□□ -1.65
KPNB1-208ENST00000580019 SND1Q7KZF4 910 aaKnown RBP eCLIP4.75□□□□□ -1.65
KPNB1-208ENST00000580019 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
KPNB1-208ENST00000580019 TSPYL5Q86VY4 417 aaPredicted RBP4.75□□□□□ -1.65
KPNB1-208ENST00000580019 SH3RF3Q8TEJ3 882 aaPredicted RBP4.75□□□□□ -1.65
KPNB1-208ENST00000580019 ELMO3Q96BJ8 720 aa4.75□□□□□ -1.65
KPNB1-208ENST00000580019 GADD45BO75293 160 aaPredicted RBP4.74□□□□□ -1.65
KPNB1-208ENST00000580019 TRIM37O94972 964 aa4.74□□□□□ -1.65
KPNB1-208ENST00000580019 MPRIPQ6WCQ1 1025 aa4.74□□□□□ -1.65
KPNB1-208ENST00000580019 DVL3Q92997 716 aaPredicted RBP4.74□□□□□ -1.65
KPNB1-208ENST00000580019 GPR62Q9BZJ7 368 aa4.74□□□□□ -1.65
KPNB1-208ENST00000580019 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
KPNB1-208ENST00000580019 EBF1Q9UH73 591 aa4.74□□□□□ -1.65
KPNB1-208ENST00000580019 IVNS1ABPQ9Y6Y0 642 aa4.74□□□□□ -1.65
KPNB1-208ENST00000580019 NOTOA8MTQ0 251 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 EIF5BO60841 1220 aaKnown RBP4.73□□□□□ -1.65
KPNB1-208ENST00000580019 MTMR3Q13615 1198 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 NKG7Q16617 165 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 CDH24Q86UP0 819 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 LINC01599Q8WXQ3 324 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 DDX1Q92499 740 aaKnown RBP4.73□□□□□ -1.65
KPNB1-208ENST00000580019 Q96M66 194 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 CCDC87Q9NVE4 849 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 SLAIN2Q9P270 581 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 PCDHA4Q9UN74 947 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 DUSP10Q9Y6W6 482 aa4.73□□□□□ -1.65
KPNB1-208ENST00000580019 RBAK-RBAKDNI3L0D1 243 aa4.72□□□□□ -1.65
KPNB1-208ENST00000580019 BUB1BO60566 1050 aaPredicted RBP4.72□□□□□ -1.65
KPNB1-208ENST00000580019 CPNE3O75131 537 aaKnown RBP4.72□□□□□ -1.65
KPNB1-208ENST00000580019 CST3P01034 146 aaPredicted RBP4.72□□□□□ -1.65
KPNB1-208ENST00000580019 ETV3P41162 512 aa4.72□□□□□ -1.65
KPNB1-208ENST00000580019 LIPIQ6XZB0 460 aa4.72□□□□□ -1.65
KPNB1-208ENST00000580019 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
KPNB1-208ENST00000580019 PCDHA5Q9Y5H7 936 aa4.72□□□□□ -1.65
KPNB1-208ENST00000580019 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
KPNB1-208ENST00000580019 PRAMEF27A3QJZ7 478 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 PNLIPP16233 465 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 GRM2Q14416 872 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 SMN1Q16637 294 aaKnown RBP4.71□□□□□ -1.66
KPNB1-208ENST00000580019 PRAMEF13Q5VWM6 474 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 HID1Q8IV36 788 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 CHST13Q8NET6 341 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 XAGE3Q8WTP9 111 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 ZNF747Q9BV97 191 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 WNT10AQ9GZT5 417 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 VPS11Q9H270 941 aa4.71□□□□□ -1.66
KPNB1-208ENST00000580019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.7□□□□□ -1.66
KPNB1-208ENST00000580019 RBM47A0AV96 593 aaKnown RBP4.7□□□□□ -1.66
KPNB1-208ENST00000580019 NRDCO43847 1150 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 EFEMP2O95967 443 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 XRCC5P13010 732 aaKnown RBP4.7□□□□□ -1.66
KPNB1-208ENST00000580019 SDHBP21912 280 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 FCGRTP55899 365 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 TMEM62Q0P6H9 643 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 KLF10Q13118 480 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 SLC14A2Q15849 920 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 TMC6Q7Z403 805 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 GRIN3AQ8TCU5 1115 aa4.7□□□□□ -1.66
KPNB1-208ENST00000580019 NISCHQ9Y2I1 1504 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 ATG7O95352 703 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 MPOP05164 745 aa4.69□□□□□ -1.66
KPNB1-208ENST00000580019 ERCC3P19447 782 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms