RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 ADCY3O60266 1144 aa32■■■□□ 2.71
LINC00271-205ENST00000579339 ELNP15502 786 aa32■■■□□ 2.71
LINC00271-205ENST00000579339 NMIQ13287 307 aaPredicted RBP32■■■□□ 2.71
LINC00271-205ENST00000579339 MTFR1Q15390 333 aa32■■■□□ 2.71
LINC00271-205ENST00000579339 TMEM106CQ9BVX2 250 aa32■■■□□ 2.71
LINC00271-205ENST00000579339 TANGO6Q9C0B7 1094 aa32■■■□□ 2.71
LINC00271-205ENST00000579339 BIN2Q9UBW5 565 aaPredicted RBP32■■■□□ 2.71
LINC00271-205ENST00000579339 CNMDO75829 334 aa31.99■■■□□ 2.71
LINC00271-205ENST00000579339 PPARAQ07869 468 aa31.99■■■□□ 2.71
LINC00271-205ENST00000579339 PORCNQ9H237 461 aa31.99■■■□□ 2.71
LINC00271-205ENST00000579339 SH2D4AQ9H788 454 aa31.99■■■□□ 2.71
LINC00271-205ENST00000579339 VCPKMTQ9H867 229 aa31.99■■■□□ 2.71
LINC00271-205ENST00000579339 SPDYE16A6NNV3 312 aaPredicted RBP31.98■■■□□ 2.71
LINC00271-205ENST00000579339 EN2P19622 333 aaPredicted RBP31.98■■■□□ 2.71
LINC00271-205ENST00000579339 SLAIN1Q8ND83 568 aa31.98■■■□□ 2.71
LINC00271-205ENST00000579339 PDE4AP27815 886 aa31.97■■■□□ 2.71
LINC00271-205ENST00000579339 IRF5Q13568 498 aa31.97■■■□□ 2.71
LINC00271-205ENST00000579339 MCMDC2Q4G0Z9 681 aa31.97■■■□□ 2.71
LINC00271-205ENST00000579339 ZNF589Q86UQ0 364 aaPredicted RBP31.97■■■□□ 2.71
LINC00271-205ENST00000579339 RABGAP1Q9Y3P9 1069 aa31.97■■■□□ 2.71
LINC00271-205ENST00000579339 RAD21O60216 631 aa31.96■■■□□ 2.71
LINC00271-205ENST00000579339 ZNF444Q8N0Y2 327 aaPredicted RBP31.96■■■□□ 2.71
LINC00271-205ENST00000579339 LPAR1Q92633 364 aa31.96■■■□□ 2.71
LINC00271-205ENST00000579339 BTBD7Q9P203 1132 aa31.96■■■□□ 2.71
LINC00271-205ENST00000579339 GJD2Q9UKL4 321 aa31.96■■■□□ 2.71
LINC00271-205ENST00000579339 GREB1LQ9C091 1923 aaPredicted RBP31.96■■■□□ 2.71
LINC00271-205ENST00000579339 SDSP20132 328 aa31.95■■■□□ 2.71
LINC00271-205ENST00000579339 ZNF287Q9HBT7 754 aa31.95■■■□□ 2.71
LINC00271-205ENST00000579339 CTDSPL2Q05D32 466 aa31.94■■■□□ 2.7
LINC00271-205ENST00000579339 COG2Q14746 738 aa31.94■■■□□ 2.7
LINC00271-205ENST00000579339 SAMD1Q6SPF0 538 aaPredicted RBP31.94■■■□□ 2.7
LINC00271-205ENST00000579339 LBX2Q6XYB7 198 aa31.94■■■□□ 2.7
LINC00271-205ENST00000579339 CCAR1Q8IX12 1150 aaKnown RBP31.94■■■□□ 2.7
LINC00271-205ENST00000579339 RBBP6Q7Z6E9 1792 aaKnown RBP31.94■■■□□ 2.7
LINC00271-205ENST00000579339 SLC3A2P08195 630 aaKnown RBP31.93■■■□□ 2.7
LINC00271-205ENST00000579339 MAPK4P31152 587 aa31.93■■■□□ 2.7
LINC00271-205ENST00000579339 UBXN2AP68543 259 aa31.93■■■□□ 2.7
LINC00271-205ENST00000579339 PDE4BQ07343 736 aa31.93■■■□□ 2.7
LINC00271-205ENST00000579339 FAM47AQ5JRC9 791 aa31.93■■■□□ 2.7
LINC00271-205ENST00000579339 TICAM2Q86XR7 235 aa31.93■■■□□ 2.7
LINC00271-205ENST00000579339 INCENPQ9NQS7 918 aa31.93■■■□□ 2.7
LINC00271-205ENST00000579339 IGKV6D-41A0A0C4DH26 115 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 WDR46O15213 610 aaKnown RBP31.92■■■□□ 2.7
LINC00271-205ENST00000579339 FLOT1O75955 427 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 INHAP05111 366 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 CCL5P13501 91 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 GPR142Q7Z601 462 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 PXYLP1Q8TE99 480 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 GOPCQ9HD26 462 aa31.92■■■□□ 2.7
LINC00271-205ENST00000579339 MKI67P46013 3256 aaKnown RBP31.92■■■□□ 2.7
LINC00271-205ENST00000579339 CEP95Q96GE4 821 aa31.91■■■□□ 2.7
LINC00271-205ENST00000579339 CWC22Q9HCG8 908 aaKnown RBP31.91■■■□□ 2.7
LINC00271-205ENST00000579339 HOXC10Q9NYD6 342 aa31.91■■■□□ 2.7
LINC00271-205ENST00000579339 CCDC171Q6TFL3 1326 aa31.91■■■□□ 2.7
LINC00271-205ENST00000579339 TNRC18O15417 2968 aaPredicted RBP31.91■■■□□ 2.7
LINC00271-205ENST00000579339 CYP2B6P20813 491 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 DSG3P32926 999 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 CCNA1P78396 465 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 WDR78Q5VTH9 848 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 PLEKHH3Q7Z736 793 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 ATG4CQ96DT6 458 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 UNC93B1Q9H1C4 597 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 NYAP2Q9P242 653 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 CLIP2Q9UDT6 1046 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 TACC3Q9Y6A5 838 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 PLXNB2O15031 1838 aa31.9■■■□□ 2.7
LINC00271-205ENST00000579339 TSPY3P0CV98 308 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 TSPY8P0CW00 308 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 HSPD1P10809 573 aaKnown RBP31.89■■■□□ 2.7
LINC00271-205ENST00000579339 TFAP4Q01664 338 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 ALX1Q15699 326 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 FAM83BQ5T0W9 1011 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 NUDT12Q9BQG2 462 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 RNF208Q9H0X6 261 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 FBXO28Q9NVF7 368 aa31.89■■■□□ 2.7
LINC00271-205ENST00000579339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.89■■■□□ 2.7
LINC00271-205ENST00000579339 RLFQ13129 1914 aa31.88■■■□□ 2.69
LINC00271-205ENST00000579339 FGAP02671 866 aa31.88■■■□□ 2.69
LINC00271-205ENST00000579339 NEDD1Q8NHV4 660 aa31.88■■■□□ 2.69
LINC00271-205ENST00000579339 SOCS4Q8WXH5 440 aa31.88■■■□□ 2.69
LINC00271-205ENST00000579339 NUP88Q99567 741 aaPredicted RBP31.88■■■□□ 2.69
LINC00271-205ENST00000579339 DIAPH3Q9NSV4 1193 aa31.88■■■□□ 2.69
LINC00271-205ENST00000579339 MTMR4Q9NYA4 1195 aa31.88■■■□□ 2.69
LINC00271-205ENST00000579339 PLIN4Q96Q06 1357 aa31.87■■■□□ 2.69
LINC00271-205ENST00000579339 CWC27Q6UX04 472 aaKnown RBP31.87■■■□□ 2.69
LINC00271-205ENST00000579339 LRRC47Q8N1G4 583 aaKnown RBP31.87■■■□□ 2.69
LINC00271-205ENST00000579339 NDUFB10O96000 172 aa31.86■■■□□ 2.69
LINC00271-205ENST00000579339 GSPT1P15170 499 aaKnown RBP31.86■■■□□ 2.69
LINC00271-205ENST00000579339 TRIM32Q13049 653 aa31.86■■■□□ 2.69
LINC00271-205ENST00000579339 ANAPC4Q9UJX5 808 aa31.86■■■□□ 2.69
LINC00271-205ENST00000579339 PDE4DIPQ5VU43 2346 aa31.86■■■□□ 2.69
LINC00271-205ENST00000579339 F5H6K3 240 aa31.85■■■□□ 2.69
LINC00271-205ENST00000579339 KLRC3Q07444 240 aa31.85■■■□□ 2.69
LINC00271-205ENST00000579339 MORN1Q5T089 497 aa31.85■■■□□ 2.69
LINC00271-205ENST00000579339 TRIB2Q92519 343 aa31.85■■■□□ 2.69
LINC00271-205ENST00000579339 SHISA4Q96DD7 197 aa31.85■■■□□ 2.69
LINC00271-205ENST00000579339 MOV10L1Q9BXT6 1211 aaKnown RBP31.85■■■□□ 2.69
LINC00271-205ENST00000579339 A0A0G2JMZ2 1700 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 TTLL1O95922 423 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 HMGCRP04035 888 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms