RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-208	ENST00000578630	STX8	Q9UNK0	236 aa		13.6	□□□□□ -0.23
ERBB2-208	ENST00000578630	GTF3C3	Q9Y5Q9	886 aa		13.6	□□□□□ -0.23
ERBB2-208	ENST00000578630	TACC3	Q9Y6A5	838 aa		13.6	□□□□□ -0.23
ERBB2-208	ENST00000578630		B4E1Z4	1266 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630		F5H6K3	240 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	FKTN	O75072	461 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	KDM4A	O75164	1064 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	CYP2C8	P10632	490 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	GCLC	P48506	637 aa	Predicted RBP	13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	SP3	Q02447	781 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	KLRC3	Q07444	240 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	DGKZ	Q13574	1117 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	NECTIN1	Q15223	517 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	CATSPERG	Q6ZRH7	1159 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	RALYL	Q86SE5	291 aa	Known RBP	13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	CLEC10A	Q8IUN9	316 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	NCOA7	Q8NI08	942 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	NBPF3	Q9H094	633 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	IL17RB	Q9NRM6	502 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	ZSWIM5	Q9P217	1185 aa		13.59	□□□□□ -0.23
ERBB2-208	ENST00000578630	PLIN4	Q96Q06	1357 aa		13.58	□□□□□ -0.23
ERBB2-208	ENST00000578630	THSD7B	Q9C0I4	1608 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630		E7EWF7	191 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	WDR46	O15213	610 aa	Known RBP	13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	EPB41L2	O43491	1005 aa	Known RBP	13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	ZKSCAN1	P17029	563 aa	Predicted RBP	13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	VCAM1	P19320	739 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	COG2	Q14746	738 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	KIF22	Q14807	665 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	CREB3L3	Q68CJ9	461 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	C17orf99	Q6UX52	265 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	DGKH	Q86XP1	1220 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	P2RX7	Q99572	595 aa	Known RBP	13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	UBAC1	Q9BSL1	405 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	R3HDML	Q9H3Y0	253 aa		13.58	□□□□□ -0.24
ERBB2-208	ENST00000578630	PCNT	O95613	3336 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	ERICH2	A1L162	156 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	SLC27A2	O14975	620 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	NMT2	O60551	498 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	TOP1	P11387	765 aa	Known RBP	13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	SLFN13	Q68D06	897 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	SPICE1	Q8N0Z3	855 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	ERO1A	Q96HE7	468 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	TANGO6	Q9C0B7	1094 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	CPA4	Q9UI42	421 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	NEDD4	P46934	1319 aa		13.57	□□□□□ -0.24
ERBB2-208	ENST00000578630	ATAD5	Q96QE3	1844 aa		13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	NOV	P48745	357 aa		13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	HERVK_113	P62684	666 aa		13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	KRT32	Q14532	448 aa		13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	SART3	Q15020	963 aa	Known RBP	13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	GMCL1P1	Q8NEA9	526 aa		13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	ZKSCAN3	Q9BRR0	538 aa		13.56	□□□□□ -0.24
ERBB2-208	ENST00000578630	PHIP	Q8WWQ0	1821 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	MYH8	P13535	1937 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	FLOT1	O75955	427 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	NDUFB10	O96000	172 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	MCC	P23508	829 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	TSGA10IP	Q3SY00	556 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	LRRC47	Q8N1G4	583 aa	Known RBP	13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	ANKRD13C	Q8N6S4	541 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	ANKS1A	Q92625	1134 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	TMEM47	Q9BQJ4	181 aa		13.55	□□□□□ -0.24
ERBB2-208	ENST00000578630	IFIT3	O14879	490 aa	Known RBP	13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	BCR	P11274	1271 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	BMP3	P12645	472 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	HOXD10	P28358	340 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	DSG3	P32926	999 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	MCM5	P33992	734 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	SLC1A4	P43007	532 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	FAM110C	Q1W6H9	321 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	KIAA1755	Q5JYT7	1200 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	FAM83B	Q5T0W9	1011 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	RCSD1	Q6JBY9	416 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	CCAR1	Q8IX12	1150 aa	Known RBP	13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	GPRC5A	Q8NFJ5	357 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	CHURC1	Q8WUH1	139 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	GMCL1	Q96IK5	515 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	NEK1	Q96PY6	1258 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	MTA3	Q9BTC8	594 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	KAT14	Q9H8E8	782 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	ISY1	Q9ULR0	285 aa	Known RBP	13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	RABGAP1	Q9Y3P9	1069 aa		13.54	□□□□□ -0.24
ERBB2-208	ENST00000578630	LAMB1	P07942	1786 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	GNRH1	P01148	92 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	HMGB1	P09429	215 aa	Known RBP	13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	HSPA4	P34932	840 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	CCNA1	P78396	465 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	IFIT1B	Q5T764	474 aa	Known RBP	13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	LBX2	Q6XYB7	198 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	CYB5R4	Q7L1T6	521 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	TMTC2	Q8N394	836 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	MB21D1	Q8N884	522 aa		13.53	□□□□□ -0.24
ERBB2-208	ENST00000578630	PRPF38A	Q8NAV1	312 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms