RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 ZBTB21Q9ULJ3 1066 aa15.64■□□□□ 0.09
SRSF1-202ENST00000578430 GDF11O95390 407 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 SLURP2P0DP57 97 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 IFNAR1P17181 557 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 GJB2P29033 226 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 GUCY1A2P33402 732 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 ADD1P35611 737 aaKnown RBP15.63■□□□□ 0.09
SRSF1-202ENST00000578430 NUCB2P80303 420 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 ICA1Q05084 483 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 GRM4Q14833 912 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 SEPT2Q15019 361 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 CDC37L1Q7L3B6 337 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 RGS22Q8NE09 1264 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 LZTS2Q9BRK4 669 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 MYL10Q9BUA6 226 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 ARHGEF10LQ9HCE6 1279 aa15.63■□□□□ 0.09
SRSF1-202ENST00000578430 FAM217BQ9NTX9 383 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-202ENST00000578430 SCAF8Q9UPN6 1271 aaKnown RBP15.63■□□□□ 0.09
SRSF1-202ENST00000578430 PTPDC1A2A3K4 754 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 CTDNEP1O95476 244 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 CDC27P30260 824 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 NF2P35240 595 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 RRP1BQ14684 758 aaKnown RBP15.62■□□□□ 0.09
SRSF1-202ENST00000578430 EAPPQ56P03 285 aaPredicted RBP15.62■□□□□ 0.09
SRSF1-202ENST00000578430 USP48Q86UV5 1035 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 STK36Q9NRP7 1315 aa15.62■□□□□ 0.09
SRSF1-202ENST00000578430 POLR2AP24928 1970 aaKnown RBP15.62■□□□□ 0.09
SRSF1-202ENST00000578430 PPP1R12BO60237 982 aaPredicted RBP15.61■□□□□ 0.09
SRSF1-202ENST00000578430 EEF2P13639 858 aaKnown RBP15.61■□□□□ 0.09
SRSF1-202ENST00000578430 RXRAP19793 462 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 SMARCA1P28370 1054 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 RAB3GAP1Q15042 981 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 NTRK3Q16288 839 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 RAB11FIP4Q86YS3 637 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 CCDC144CPQ8IYA2 1237 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 TRIM22Q8IYM9 498 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 FAM184AQ8NB25 1140 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 WASF1Q92558 559 aa15.61■□□□□ 0.09
SRSF1-202ENST00000578430 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
SRSF1-202ENST00000578430 PALM3A6NDB9 673 aaPredicted RBP15.6■□□□□ 0.09
SRSF1-202ENST00000578430 ADM5C9JUS6 153 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 JAK2O60674 1132 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 SNHG28P0DPA3 235 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 SSRP1Q08945 709 aaKnown RBP15.6■□□□□ 0.09
SRSF1-202ENST00000578430 NOL9Q5SY16 702 aaKnown RBP15.6■□□□□ 0.09
SRSF1-202ENST00000578430 GPATCH4Q5T3I0 446 aaKnown RBP15.6■□□□□ 0.09
SRSF1-202ENST00000578430 TMTC3Q6ZXV5 915 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 LDHDQ86WU2 507 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 SCYL3Q8IZE3 742 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 GMCL1P1Q8NEA9 526 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 DCAF4Q8WV16 495 aa15.6■□□□□ 0.09
SRSF1-202ENST00000578430 RNF26Q9BY78 433 aaPredicted RBP15.6■□□□□ 0.09
SRSF1-202ENST00000578430 ORC3Q9UBD5 711 aaPredicted RBP15.6■□□□□ 0.09
SRSF1-202ENST00000578430 SSC5DA1L4H1 1573 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 MYH4Q9Y623 1939 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 FMNL1O95466 1100 aaPredicted RBP15.59■□□□□ 0.09
SRSF1-202ENST00000578430 PARP1P09874 1014 aaKnown RBP15.59■□□□□ 0.09
SRSF1-202ENST00000578430 PDHBP11177 359 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 JAG1P78504 1218 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 ATP2B2Q01814 1243 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 SIAH1Q8IUQ4 282 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 CDCA5Q96FF9 252 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 WRNIP1Q96S55 665 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 TMX2Q9Y320 296 aa15.59■□□□□ 0.09
SRSF1-202ENST00000578430 WDR33Q9C0J8 1336 aaKnown RBP15.59■□□□□ 0.09
SRSF1-202ENST00000578430 USP17L5A8MUK1 530 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 AKAP17AQ02040 695 aaKnown RBP15.58■□□□□ 0.08
SRSF1-202ENST00000578430 FUT2Q10981 343 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 SHROOM1Q2M3G4 852 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-202ENST00000578430 PRAMEF18Q5VWM3 479 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 LARP1BQ659C4 914 aaKnown RBP15.58■□□□□ 0.08
SRSF1-202ENST00000578430 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 CLEC10AQ8IUN9 316 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 LRRC47Q8N1G4 583 aaKnown RBP15.58■□□□□ 0.08
SRSF1-202ENST00000578430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.58■□□□□ 0.08
SRSF1-202ENST00000578430 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 AS3MTQ9HBK9 375 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 GOPCQ9HD26 462 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 PICK1Q9NRD5 415 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 MAD2L2Q9UI95 211 aa15.58■□□□□ 0.08
SRSF1-202ENST00000578430 ATAD5Q96QE3 1844 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 DOCK1Q14185 1865 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 UNCXA6NJT0 531 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 KLRF2D3W0D1 207 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 F5H6K3 240 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 PRPF3O43395 683 aaKnown RBP15.57■□□□□ 0.08
SRSF1-202ENST00000578430 STX6O43752 255 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 USP2O75604 605 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-202ENST00000578430 DEXIO95424 95 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 FDPSP14324 419 aaKnown RBP15.57■□□□□ 0.08
SRSF1-202ENST00000578430 SYT1P21579 422 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 INPP5BP32019 993 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 IREB2P48200 963 aaKnown RBP15.57■□□□□ 0.08
SRSF1-202ENST00000578430 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
SRSF1-202ENST00000578430 KLRC3Q07444 240 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms