RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PARP1P09874 1014 aaKnown RBP21.52■■□□□ 1.03
PRKCA-203ENST00000578063 EPS15P42566 896 aa21.52■■□□□ 1.03
PRKCA-203ENST00000578063 RESTQ13127 1097 aa21.52■■□□□ 1.03
PRKCA-203ENST00000578063 CLEC10AQ8IUN9 316 aa21.52■■□□□ 1.03
PRKCA-203ENST00000578063 CDAN1Q8IWY9 1227 aa21.52■■□□□ 1.03
PRKCA-203ENST00000578063 ASTN2O75129 1339 aaPredicted RBP21.52■■□□□ 1.03
PRKCA-203ENST00000578063 PALM3A6NDB9 673 aaPredicted RBP21.51■■□□□ 1.03
PRKCA-203ENST00000578063 ICA1Q05084 483 aa21.51■■□□□ 1.03
PRKCA-203ENST00000578063 DPY19L2Q6NUT2 758 aa21.51■■□□□ 1.03
PRKCA-203ENST00000578063 LRRC47Q8N1G4 583 aaKnown RBP21.51■■□□□ 1.03
PRKCA-203ENST00000578063 SRBD1Q8N5C6 995 aaKnown RBP21.51■■□□□ 1.03
PRKCA-203ENST00000578063 TEPSINQ96N21 525 aa21.51■■□□□ 1.03
PRKCA-203ENST00000578063 DEFB129Q9H1M3 183 aa21.51■■□□□ 1.03
PRKCA-203ENST00000578063 ADARB2Q9NS39 739 aaKnown RBP21.51■■□□□ 1.03
PRKCA-203ENST00000578063 GH2P01242 217 aa21.5■■□□□ 1.03
PRKCA-203ENST00000578063 GUCY1B3Q02153 619 aa21.5■■□□□ 1.03
PRKCA-203ENST00000578063 SEPT2Q15019 361 aa21.5■■□□□ 1.03
PRKCA-203ENST00000578063 ANGEL2Q5VTE6 544 aaKnown RBP21.5■■□□□ 1.03
PRKCA-203ENST00000578063 MKL1Q969V6 931 aa21.5■■□□□ 1.03
PRKCA-203ENST00000578063 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
PRKCA-203ENST00000578063 SNHG28P0DPA3 235 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 PDHBP11177 359 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 ASPRV1Q53RT3 343 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 HOOK2Q96ED9 719 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 SYNPO2Q9UMS6 1093 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 MTMR7Q9Y216 660 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 PPP2R3BQ9Y5P8 575 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 EEF2P13639 858 aaKnown RBP21.49■■□□□ 1.03
PRKCA-203ENST00000578063 XBP1P17861 261 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 SMARCA1P28370 1054 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 GUCY1A2P33402 732 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 ATP2B2Q01814 1243 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
PRKCA-203ENST00000578063 FOXD4L6Q3SYB3 417 aaPredicted RBP21.49■■□□□ 1.03
PRKCA-203ENST00000578063 KRT40Q6A162 431 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 FOXD4L3Q6VB84 417 aaPredicted RBP21.49■■□□□ 1.03
PRKCA-203ENST00000578063 STAG2Q8N3U4 1231 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 L3MBTL3Q96JM7 780 aaPredicted RBP21.49■■□□□ 1.03
PRKCA-203ENST00000578063 PITPNM2Q9BZ72 1349 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 GGA3Q9NZ52 723 aa21.49■■□□□ 1.03
PRKCA-203ENST00000578063 V9GY48 417 aaPredicted RBP21.49■■□□□ 1.03
PRKCA-203ENST00000578063 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
PRKCA-203ENST00000578063 OTUD7BQ6GQQ9 843 aa21.48■■□□□ 1.03
PRKCA-203ENST00000578063 MIGA2Q7L4E1 593 aa21.48■■□□□ 1.03
PRKCA-203ENST00000578063 SPZ1Q9BXG8 430 aa21.48■■□□□ 1.03
PRKCA-203ENST00000578063 ZBTB21Q9ULJ3 1066 aa21.48■■□□□ 1.03
PRKCA-203ENST00000578063 USP17L5A8MUK1 530 aa21.47■■□□□ 1.03
PRKCA-203ENST00000578063 KLRF2D3W0D1 207 aa21.47■■□□□ 1.03
PRKCA-203ENST00000578063 UBE2Q2LH0YL09 131 aa21.47■■□□□ 1.03
PRKCA-203ENST00000578063 HIRAP54198 1017 aaPredicted RBP21.47■■□□□ 1.03
PRKCA-203ENST00000578063 PKN1Q16512 942 aa21.47■■□□□ 1.03
PRKCA-203ENST00000578063 CHAMP1Q96JM3 812 aa21.47■■□□□ 1.03
PRKCA-203ENST00000578063 CAP2P40123 477 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 KRT85P78386 507 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 DNM1Q05193 864 aaKnown RBP21.46■■□□□ 1.03
PRKCA-203ENST00000578063 CSPP1Q1MSJ5 1256 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 USP17L2Q6R6M4 530 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 BRAPQ7Z569 592 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 ANP32EQ9BTT0 268 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 GJB4Q9NTQ9 266 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 SCAF8Q9UPN6 1271 aaKnown RBP21.46■■□□□ 1.03
PRKCA-203ENST00000578063 JAG1P78504 1218 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 KIF23Q02241 960 aaPredicted RBP21.46■■□□□ 1.03
PRKCA-203ENST00000578063 GPATCH4Q5T3I0 446 aaKnown RBP21.46■■□□□ 1.03
PRKCA-203ENST00000578063 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 TMEM87AQ8NBN3 555 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 GINM1Q9NU53 330 aa21.46■■□□□ 1.03
PRKCA-203ENST00000578063 GOLGA8HP0CJ92 632 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 SCG2P13521 617 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 NCLP19338 710 aaKnown RBP21.45■■□□□ 1.02
PRKCA-203ENST00000578063 ZNF543Q08ER8 600 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 SAFBQ15424 915 aaKnown RBP eCLIP21.45■■□□□ 1.02
PRKCA-203ENST00000578063 PFKFB3Q16875 520 aaPredicted RBP21.45■■□□□ 1.02
PRKCA-203ENST00000578063 RASGRP2Q7LDG7 609 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 SIAH1Q8IUQ4 282 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 GMCL1P1Q8NEA9 526 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 DCAF4Q8WV16 495 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 ARHGEF10LQ9HCE6 1279 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 CNPY2Q9Y2B0 182 aa21.45■■□□□ 1.02
PRKCA-203ENST00000578063 MYH4Q9Y623 1939 aa21.44■■□□□ 1.02
PRKCA-203ENST00000578063 MMP1P03956 469 aa21.44■■□□□ 1.02
PRKCA-203ENST00000578063 ASNSP08243 561 aa21.44■■□□□ 1.02
PRKCA-203ENST00000578063 ATL3Q6DD88 541 aa21.44■■□□□ 1.02
PRKCA-203ENST00000578063 LMBRD1Q9NUN5 540 aa21.44■■□□□ 1.02
PRKCA-203ENST00000578063 PHF20L1A8MW92 1017 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 SKOR2Q2VWA4 1001 aaPredicted RBP21.43■■□□□ 1.02
PRKCA-203ENST00000578063 UTRNP46939 3433 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 hCG_1642624A0A1W2PR95 340 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 GLTPD2A6NH11 291 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 CYTH3O43739 400 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 GNL2Q13823 731 aaKnown RBP21.43■■□□□ 1.02
PRKCA-203ENST00000578063 CCDC96Q2M329 555 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 NBPF12Q5TAG4 269 aaPredicted RBP21.43■■□□□ 1.02
PRKCA-203ENST00000578063 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 FAM173BQ6P4H8 233 aa21.43■■□□□ 1.02
PRKCA-203ENST00000578063 ZNF396Q96N95 335 aaPredicted RBP21.43■■□□□ 1.02
PRKCA-203ENST00000578063 SCAND2PQ9GZW5 306 aaPredicted RBP21.43■■□□□ 1.02
PRKCA-203ENST00000578063 FRMPD2Q68DX3 1309 aaPredicted RBP21.42■■□□□ 1.02
PRKCA-203ENST00000578063 FIBPO43427 364 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 PRPF40AO75400 957 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms