RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 UFL1O94874 794 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 GJC1P36383 396 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 DNM2P50570 870 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 WDR78Q5VTH9 848 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 RABGGTAQ92696 567 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNF43-203ENST00000577716 CSRNP2Q9H175 543 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 HAUS4Q9H6D7 363 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 H7C1D1 291 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 EPB41P11171 864 aaKnown RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 CASP14P31944 242 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 ACTN2P35609 894 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 SF3B2Q13435 895 aaKnown RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 STMN4Q9H169 189 aaPredicted RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 EPN1Q9Y6I3 576 aaPredicted RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 CEP104O60308 925 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 SCG2P13521 617 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 KLHL30Q0D2K2 578 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 CALCRLQ16602 461 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 INF2Q27J81 1249 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 ATP6V0A2Q9Y487 856 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 ERBB3P21860 1342 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 NR5A1Q13285 461 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 ASIC2Q16515 512 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 KLHL7Q8IXQ5 586 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 GSDMAQ96QA5 445 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 CDC23Q9UJX2 597 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 PTPRMP28827 1452 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 PPFIA1Q13136 1202 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 CALCOCO2Q13137 446 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 TGFBRAP1Q8WUH2 860 aa12.14□□□□□ -0.47
RNF43-203ENST00000577716 FOXP1Q9H334 677 aaPredicted RBP12.14□□□□□ -0.47
RNF43-203ENST00000577716 MAP3K15Q6ZN16 1313 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 ADD2P35612 726 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 ADCY7P51828 1080 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 PPARDQ03181 441 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 CFAP221Q4G0U5 840 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 B4GALNT4Q76KP1 1039 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 IKBKGQ9Y6K9 419 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
RNF43-203ENST00000577716 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
RNF43-203ENST00000577716 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 COBLO75128 1261 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
RNF43-203ENST00000577716 PLCB3Q01970 1234 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 DMTNQ08495 405 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 PAK2Q13177 524 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 FBF1Q8TES7 1133 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
RNF43-203ENST00000577716 MTUS1Q9ULD2 1270 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
RNF43-203ENST00000577716 SEC31AO94979 1220 aaKnown RBP12.12□□□□□ -0.47
RNF43-203ENST00000577716 IFNAR1P17181 557 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
RNF43-203ENST00000577716 SLC35F6Q8N357 371 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
RNF43-203ENST00000577716 PLEKHA4Q9H4M7 779 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 RPN1P04843 607 aaKnown RBP12.12□□□□□ -0.47
RNF43-203ENST00000577716 TNFAIP3P21580 790 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 INPP5BP32019 993 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 NF2P35240 595 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 SRGAP1Q7Z6B7 1085 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 TRIM58Q8NG06 486 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 DDX12PQ92771 950 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
RNF43-203ENST00000577716 LRRC45Q96CN5 670 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 IQGAP1P46940 1657 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 KIDINS220Q9ULH0 1771 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 AEBP2Q6ZN18 517 aaPredicted RBP12.12□□□□□ -0.47
RNF43-203ENST00000577716 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 ATG3Q9NT62 314 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 ZSWIM5Q9P217 1185 aa12.12□□□□□ -0.47
RNF43-203ENST00000577716 A6NNZ2 444 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 NEBLO76041 1014 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 SFMBT2Q5VUG0 894 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms