RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 NBPF3Q9H094 633 aa23.17■■□□□ 1.3
SCO1-202ENST00000577335 CPA4Q9UI42 421 aa23.17■■□□□ 1.3
SCO1-202ENST00000577335 MYH8P13535 1937 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 KIF22Q14807 665 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 FAM47AQ5JRC9 791 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 CATSPERGQ6ZRH7 1159 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 MAP4K1Q92918 833 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 TOMM22Q9NS69 142 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 TACC3Q9Y6A5 838 aa23.16■■□□□ 1.3
SCO1-202ENST00000577335 WDR46O15213 610 aaKnown RBP23.15■■□□□ 1.3
SCO1-202ENST00000577335 PTH1RQ03431 593 aa23.15■■□□□ 1.3
SCO1-202ENST00000577335 PKN2Q16513 984 aaKnown RBP23.15■■□□□ 1.3
SCO1-202ENST00000577335 ESR2Q92731 530 aa23.15■■□□□ 1.3
SCO1-202ENST00000577335 INCENPQ9NQS7 918 aa23.15■■□□□ 1.3
SCO1-202ENST00000577335 TCP11L1Q9NUJ3 509 aa23.15■■□□□ 1.3
SCO1-202ENST00000577335 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
SCO1-202ENST00000577335 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.3
SCO1-202ENST00000577335 GNRH1P01148 92 aa23.14■■□□□ 1.29
SCO1-202ENST00000577335 NOVP48745 357 aa23.14■■□□□ 1.29
SCO1-202ENST00000577335 HERVK_113P62684 666 aa23.14■■□□□ 1.29
SCO1-202ENST00000577335 LACTBP83111 547 aaPredicted RBP23.14■■□□□ 1.29
SCO1-202ENST00000577335 FAM110CQ1W6H9 321 aa23.14■■□□□ 1.29
SCO1-202ENST00000577335 RPAP3Q9H6T3 665 aaPredicted RBP23.14■■□□□ 1.29
SCO1-202ENST00000577335 CNNM2Q9H8M5 875 aa23.14■■□□□ 1.29
SCO1-202ENST00000577335 RRP12Q5JTH9 1297 aaKnown RBP23.13■■□□□ 1.29
SCO1-202ENST00000577335 LBX2Q6XYB7 198 aa23.13■■□□□ 1.29
SCO1-202ENST00000577335 P2RX7Q99572 595 aaKnown RBP23.13■■□□□ 1.29
SCO1-202ENST00000577335 KRT23Q9C075 422 aa23.13■■□□□ 1.29
SCO1-202ENST00000577335 HOXC10Q9NYD6 342 aa23.13■■□□□ 1.29
SCO1-202ENST00000577335 MORF4L1Q9UBU8 362 aa23.13■■□□□ 1.29
SCO1-202ENST00000577335 CCDC178Q5BJE1 867 aa23.12■■□□□ 1.29
SCO1-202ENST00000577335 GMCL1P1Q8NEA9 526 aa23.12■■□□□ 1.29
SCO1-202ENST00000577335 CD99L2Q8TCZ2 262 aa23.12■■□□□ 1.29
SCO1-202ENST00000577335 IL17RBQ9NRM6 502 aa23.12■■□□□ 1.29
SCO1-202ENST00000577335 MYPNQ86TC9 1320 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 F5H6K3 240 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 KLRC3Q07444 240 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 COG2Q14746 738 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 KIAA1755Q5JYT7 1200 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 TNS4Q8IZW8 715 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 TTC14Q96N46 770 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 TANGO6Q9C0B7 1094 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 LSG1Q9H089 658 aaKnown RBP23.11■■□□□ 1.29
SCO1-202ENST00000577335 EFCC1Q9HA90 598 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 STX8Q9UNK0 236 aa23.11■■□□□ 1.29
SCO1-202ENST00000577335 CYP21A2P08686 494 aa23.1■■□□□ 1.29
SCO1-202ENST00000577335 SPICE1Q8N0Z3 855 aa23.1■■□□□ 1.29
SCO1-202ENST00000577335 ANO2Q9NQ90 1003 aa23.1■■□□□ 1.29
SCO1-202ENST00000577335 RBM8AQ9Y5S9 174 aaKnown RBP23.1■■□□□ 1.29
SCO1-202ENST00000577335 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
SCO1-202ENST00000577335 NEDD4P46934 1319 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 PRMT2P55345 433 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 TRDNQ13061 729 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 OTOP1Q7RTM1 612 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 IQCA1Q86XH1 822 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 RABGAP1Q9Y3P9 1069 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 TRIM17Q9Y577 477 aa23.09■■□□□ 1.29
SCO1-202ENST00000577335 NDUFB10O96000 172 aa23.08■■□□□ 1.29
SCO1-202ENST00000577335 HOXD10P28358 340 aa23.08■■□□□ 1.29
SCO1-202ENST00000577335 FCGRTP55899 365 aa23.08■■□□□ 1.29
SCO1-202ENST00000577335 MB21D1Q8N884 522 aa23.08■■□□□ 1.29
SCO1-202ENST00000577335 GPRC5AQ8NFJ5 357 aa23.08■■□□□ 1.29
SCO1-202ENST00000577335 RBPJLQ9UBG7 517 aa23.08■■□□□ 1.29
SCO1-202ENST00000577335 LAMA4Q16363 1823 aa23.08■■□□□ 1.28
SCO1-202ENST00000577335 SPDYE16A6NNV3 312 aaPredicted RBP23.07■■□□□ 1.28
SCO1-202ENST00000577335 NMT2O60551 498 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 KDM4AO75164 1064 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 FLOT1O75955 427 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 TOP1P11387 765 aaKnown RBP23.07■■□□□ 1.28
SCO1-202ENST00000577335 PSMC4P43686 418 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 FBXO46Q6PJ61 603 aaPredicted RBP23.07■■□□□ 1.28
SCO1-202ENST00000577335 DGKHQ86XP1 1220 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 LRRC47Q8N1G4 583 aaKnown RBP23.07■■□□□ 1.28
SCO1-202ENST00000577335 GMCL1Q96IK5 515 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 MCOLN1Q9GZU1 580 aa23.07■■□□□ 1.28
SCO1-202ENST00000577335 B4E1Z4 1266 aa23.06■■□□□ 1.28
SCO1-202ENST00000577335 RAD21O60216 631 aa23.06■■□□□ 1.28
SCO1-202ENST00000577335 FMNL1O95466 1100 aaPredicted RBP23.06■■□□□ 1.28
SCO1-202ENST00000577335 DSG3P32926 999 aa23.06■■□□□ 1.28
SCO1-202ENST00000577335 SLFN13Q68D06 897 aa23.06■■□□□ 1.28
SCO1-202ENST00000577335 ZSWIM5Q9P217 1185 aa23.06■■□□□ 1.28
SCO1-202ENST00000577335 ERVK-9P63128 1117 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 ERVK-24P63145 666 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 CCNA1P78396 465 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 FAM83BQ5T0W9 1011 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 RNF20Q5VTR2 975 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 ANKS1AQ92625 1134 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 TRIM47Q96LD4 638 aa23.05■■□□□ 1.28
SCO1-202ENST00000577335 E7EWF7 191 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 NECTIN1Q15223 517 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 RALYLQ86SE5 291 aaKnown RBP23.04■■□□□ 1.28
SCO1-202ENST00000577335 NCOA7Q8NI08 942 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
SCO1-202ENST00000577335 TMEM47Q9BQJ4 181 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 ARHGAP39Q9C0H5 1083 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 TXNRD2Q9NNW7 524 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 FEM1BQ9UK73 627 aa23.04■■□□□ 1.28
SCO1-202ENST00000577335 ADAMTS5Q9UNA0 930 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms