RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
VPS33B-208ENST00000574755 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
VPS33B-208ENST00000574755 MASTLQ96GX5 879 aa16.1■□□□□ 0.17
VPS33B-208ENST00000574755 EYA3Q99504 573 aa16.1■□□□□ 0.17
VPS33B-208ENST00000574755 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
VPS33B-208ENST00000574755 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
VPS33B-208ENST00000574755 GRM4Q14833 912 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 TNFRSF25Q93038 417 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 SNED1Q8TER0 1413 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 G3V3G9 751 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
VPS33B-208ENST00000574755 PTGS1P23219 599 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 GNAQP50148 359 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
VPS33B-208ENST00000574755 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 HOOK1Q9UJC3 728 aaKnown RBP16.09■□□□□ 0.17
VPS33B-208ENST00000574755 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
VPS33B-208ENST00000574755 POLR2DO15514 142 aaKnown RBP16.08■□□□□ 0.17
VPS33B-208ENST00000574755 PICALMQ13492 652 aa16.08■□□□□ 0.17
VPS33B-208ENST00000574755 NOM1Q5C9Z4 860 aaKnown RBP16.08■□□□□ 0.17
VPS33B-208ENST00000574755 CCDC186Q7Z3E2 898 aa16.08■□□□□ 0.17
VPS33B-208ENST00000574755 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.177e-6■■■■□ 22.7
VPS33B-208ENST00000574755 CSRNP2Q9H175 543 aa16.08■□□□□ 0.17
VPS33B-208ENST00000574755 BMP15O95972 392 aa16.08■□□□□ 0.16
VPS33B-208ENST00000574755 CDC25BP30305 580 aa16.08■□□□□ 0.16
VPS33B-208ENST00000574755 CERS5Q8N5B7 392 aa16.08■□□□□ 0.16
VPS33B-208ENST00000574755 MRFAP1L1Q96HT8 127 aa16.08■□□□□ 0.16
VPS33B-208ENST00000574755 NRBP1Q9UHY1 535 aa16.08■□□□□ 0.16
VPS33B-208ENST00000574755 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
VPS33B-208ENST00000574755 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 NEDD1Q8NHV4 660 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.16
VPS33B-208ENST00000574755 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 WNT7AO00755 349 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 CALML3P27482 149 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 RXRBP28702 533 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 ZNF174Q15697 407 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 PDILTQ8N807 584 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
VPS33B-208ENST00000574755 MORC2Q9Y6X9 1032 aaPredicted RBP16.07■□□□□ 0.16
VPS33B-208ENST00000574755 TPM4P67936 248 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 PCDHA5Q9Y5H7 936 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 FOXN1O15353 648 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 NOLC1Q14978 699 aaKnown RBP eCLIP16.06■□□□□ 0.16
VPS33B-208ENST00000574755 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 ELOA2Q8IYF1 753 aaPredicted RBP16.06■□□□□ 0.16
VPS33B-208ENST00000574755 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 SERTAD1Q9UHV2 236 aa16.06■□□□□ 0.16
VPS33B-208ENST00000574755 GOLGB1Q14789 3259 aaKnown RBP16.06■□□□□ 0.16
VPS33B-208ENST00000574755 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
VPS33B-208ENST00000574755 MYH8P13535 1937 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 PALM3A6NDB9 673 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-208ENST00000574755 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 SCNN1DP51172 638 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 POSTNQ15063 836 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 FOXP4Q8IVH2 680 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-208ENST00000574755 BLIDQ8IZY5 108 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 C17orf53Q8N3J3 647 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-208ENST00000574755 CEP95Q96GE4 821 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 CYTH3O43739 400 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 TRAPPC10P48553 1259 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-208ENST00000574755 PTGDRQ13258 359 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 C2CD5Q86YS7 1000 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 PYCARDQ9ULZ3 195 aa16.05■□□□□ 0.16
VPS33B-208ENST00000574755 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 ADAMTS3O15072 1205 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 RASGRP2Q7LDG7 609 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 HEATR3Q7Z4Q2 680 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 KIAA1524Q8TCG1 905 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 EPSTI1Q96J88 318 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 PCDHA4Q9UN74 947 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 IKBKBO14920 756 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 PARP1P09874 1014 aaKnown RBP16.04■□□□□ 0.16
VPS33B-208ENST00000574755 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
VPS33B-208ENST00000574755 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
VPS33B-208ENST00000574755 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 DBNDD1Q9H9R9 158 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
VPS33B-208ENST00000574755 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 H0YIN7 160 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 ACTN4O43707 911 aaKnown RBP16.03■□□□□ 0.16
VPS33B-208ENST00000574755 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
VPS33B-208ENST00000574755 MCM7P33993 719 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 NCAPHQ15003 741 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 WWC2Q6AWC2 1192 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 TYW1BQ6NUM6 668 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms