RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 NPLOC4Q8TAT6 608 aa26.61■■□□□ 1.85
SNF8-216ENST00000573795 DDX19BQ9UMR2 479 aa26.61■■□□□ 1.85
SNF8-216ENST00000573795 SMIM22K7EJ46 135 aa26.6■■□□□ 1.85
SNF8-216ENST00000573795 MPHOSPH10O00566 681 aaKnown RBP26.6■■□□□ 1.85
SNF8-216ENST00000573795 PRKAB2O43741 272 aa26.6■■□□□ 1.85
SNF8-216ENST00000573795 HMMRO75330 724 aa26.6■■□□□ 1.85
SNF8-216ENST00000573795 GLRX3O76003 335 aaKnown RBP26.6■■□□□ 1.85
SNF8-216ENST00000573795 CHGBP05060 677 aa26.6■■□□□ 1.85
SNF8-216ENST00000573795 ADD2P35612 726 aa26.6■■□□□ 1.85
SNF8-216ENST00000573795 MAGEA10P43363 369 aaPredicted RBP26.6■■□□□ 1.85
SNF8-216ENST00000573795 DYNLL2Q96FJ2 89 aa26.6■■□□□ 1.85
SNF8-216ENST00000573795 RAB11FIP3O75154 756 aa26.59■■□□□ 1.85
SNF8-216ENST00000573795 LRRC26Q2I0M4 334 aa26.59■■□□□ 1.85
SNF8-216ENST00000573795 CLEC10AQ8IUN9 316 aa26.59■■□□□ 1.85
SNF8-216ENST00000573795 SIAH1Q8IUQ4 282 aa26.59■■□□□ 1.85
SNF8-216ENST00000573795 BOLA2Q9H3K6 86 aa26.59■■□□□ 1.85
SNF8-216ENST00000573795 PAG1Q9NWQ8 432 aa26.59■■□□□ 1.85
SNF8-216ENST00000573795 TRPV1Q8NER1 839 aa26.58■■□□□ 1.85
SNF8-216ENST00000573795 MOV10L1Q9BXT6 1211 aaKnown RBP26.58■■□□□ 1.85
SNF8-216ENST00000573795 BCL11AQ9H165 835 aa26.58■■□□□ 1.85
SNF8-216ENST00000573795 MBD4O95243 580 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 AKR1B1P15121 316 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 ATP5JP18859 108 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 COG2Q14746 738 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 MFSD14CQ5VZR4 134 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 TMEM179Q6ZVK1 233 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 SWAP70Q9UH65 585 aa26.57■■□□□ 1.84
SNF8-216ENST00000573795 CYP2C19P33261 490 aa26.56■■□□□ 1.84
SNF8-216ENST00000573795 HAUS7Q99871 368 aa26.56■■□□□ 1.84
SNF8-216ENST00000573795 DDX20Q9UHI6 824 aaKnown RBP26.56■■□□□ 1.84
SNF8-216ENST00000573795 IVNS1ABPQ9Y6Y0 642 aa26.56■■□□□ 1.84
SNF8-216ENST00000573795 CYP2D7A0A087X1C5 515 aa26.55■■□□□ 1.84
SNF8-216ENST00000573795 TANGO6Q9C0B7 1094 aa26.55■■□□□ 1.84
SNF8-216ENST00000573795 SPATC1LQ9H0A9 340 aa26.55■■□□□ 1.84
SNF8-216ENST00000573795 COL11A1P12107 1806 aaPredicted RBP26.54■■□□□ 1.84
SNF8-216ENST00000573795 ATP2B2Q01814 1243 aa26.54■■□□□ 1.84
SNF8-216ENST00000573795 ATP8A2Q9NTI2 1148 aa26.54■■□□□ 1.84
SNF8-216ENST00000573795 HOXC10Q9NYD6 342 aa26.54■■□□□ 1.84
SNF8-216ENST00000573795 CYBAP13498 195 aa26.53■■□□□ 1.84
SNF8-216ENST00000573795 ADORA2AP29274 412 aa26.53■■□□□ 1.84
SNF8-216ENST00000573795 DSG3P32926 999 aa26.53■■□□□ 1.84
SNF8-216ENST00000573795 C12orf60Q5U649 245 aa26.53■■□□□ 1.84
SNF8-216ENST00000573795 SHCBP1Q8NEM2 672 aa26.53■■□□□ 1.84
SNF8-216ENST00000573795 TMX2Q9Y320 296 aa26.53■■□□□ 1.84
SNF8-216ENST00000573795 ERCC3P19447 782 aa26.52■■□□□ 1.84
SNF8-216ENST00000573795 LAMA2P24043 3122 aaKnown RBP26.52■■□□□ 1.84
SNF8-216ENST00000573795 ICA1Q05084 483 aa26.52■■□□□ 1.84
SNF8-216ENST00000573795 LRIT3Q3SXY7 679 aa26.52■■□□□ 1.84
SNF8-216ENST00000573795 TDHQ8IZJ6 230 aa26.52■■□□□ 1.84
SNF8-216ENST00000573795 LPAR1Q92633 364 aa26.52■■□□□ 1.84
SNF8-216ENST00000573795 ATG4CQ96DT6 458 aa26.52■■□□□ 1.84
SNF8-216ENST00000573795 GREB1LQ9C091 1923 aaPredicted RBP26.51■■□□□ 1.83
SNF8-216ENST00000573795 COBLO75128 1261 aa26.51■■□□□ 1.83
SNF8-216ENST00000573795 CDK8P49336 464 aa26.51■■□□□ 1.83
SNF8-216ENST00000573795 UBE3CQ15386 1083 aa26.51■■□□□ 1.83
SNF8-216ENST00000573795 OLFML2BQ68BL8 750 aa26.51■■□□□ 1.83
SNF8-216ENST00000573795 SPICE1Q8N0Z3 855 aa26.51■■□□□ 1.83
SNF8-216ENST00000573795 VCPKMTQ9H867 229 aa26.51■■□□□ 1.83
SNF8-216ENST00000573795 ZNFX1Q9P2E3 1918 aaKnown RBP26.5■■□□□ 1.83
SNF8-216ENST00000573795 USP17L12C9JPN9 530 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 USP17L21D6R901 530 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 MSCO60682 206 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 CNGA1P29973 690 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 C20orf194Q5TEA3 1177 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 C16orf86Q6ZW13 317 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 MB21D1Q8N884 522 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 UBE2OQ9C0C9 1292 aaKnown RBP26.5■■□□□ 1.83
SNF8-216ENST00000573795 SENP6Q9GZR1 1112 aaPredicted RBP26.5■■□□□ 1.83
SNF8-216ENST00000573795 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.5■■□□□ 1.83
SNF8-216ENST00000573795 ARHGEF10LQ9HCE6 1279 aa26.5■■□□□ 1.83
SNF8-216ENST00000573795 STRNO43815 780 aa26.49■■□□□ 1.83
SNF8-216ENST00000573795 FLOT1O75955 427 aa26.49■■□□□ 1.83
SNF8-216ENST00000573795 GPR153Q6NV75 609 aa26.49■■□□□ 1.83
SNF8-216ENST00000573795 DPP9Q86TI2 863 aa26.49■■□□□ 1.83
SNF8-216ENST00000573795 PUS7LQ9H0K6 701 aaKnown RBP26.49■■□□□ 1.83
SNF8-216ENST00000573795 LTBP2Q14767 1821 aa26.49■■□□□ 1.83
SNF8-216ENST00000573795 DNM1LO00429 736 aa26.48■■□□□ 1.83
SNF8-216ENST00000573795 SMARCA5O60264 1052 aaPredicted RBP26.48■■□□□ 1.83
SNF8-216ENST00000573795 CCDC17Q96LX7 622 aa26.48■■□□□ 1.83
SNF8-216ENST00000573795 RCAN3Q9UKA8 241 aa26.48■■□□□ 1.83
SNF8-216ENST00000573795 WDR46O15213 610 aaKnown RBP26.47■■□□□ 1.83
SNF8-216ENST00000573795 MDM2Q00987 491 aaPredicted RBP26.47■■□□□ 1.83
SNF8-216ENST00000573795 CTR9Q6PD62 1173 aa26.47■■□□□ 1.83
SNF8-216ENST00000573795 MROH8Q9H579 483 aa26.47■■□□□ 1.83
SNF8-216ENST00000573795 SH2D4AQ9H788 454 aa26.47■■□□□ 1.83
SNF8-216ENST00000573795 SLC4A4Q9Y6R1 1079 aa26.47■■□□□ 1.83
SNF8-216ENST00000573795 EEF2P13639 858 aaKnown RBP26.46■■□□□ 1.83
SNF8-216ENST00000573795 PLS1Q14651 629 aa26.46■■□□□ 1.83
SNF8-216ENST00000573795 TMEM132BQ14DG7 1078 aa26.46■■□□□ 1.83
SNF8-216ENST00000573795 Q7L0L9 218 aa26.46■■□□□ 1.83
SNF8-216ENST00000573795 ABRAQ8N0Z2 381 aa26.46■■□□□ 1.83
SNF8-216ENST00000573795 LRRCC1Q9C099 1032 aa26.46■■□□□ 1.83
SNF8-216ENST00000573795 ADAMTS5Q9UNA0 930 aa26.46■■□□□ 1.83
SNF8-216ENST00000573795 ATN1P54259 1190 aaPredicted RBP26.45■■□□□ 1.82
SNF8-216ENST00000573795 ANO1Q5XXA6 986 aa26.45■■□□□ 1.82
SNF8-216ENST00000573795 NCAPG2Q86XI2 1143 aa26.45■■□□□ 1.82
SNF8-216ENST00000573795 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.45■■□□□ 1.82
SNF8-216ENST00000573795 CHMP4BQ9H444 224 aaKnown RBP26.45■■□□□ 1.82
SNF8-216ENST00000573795 FBXO28Q9NVF7 368 aa26.45■■□□□ 1.82
SNF8-216ENST00000573795 PLXNA1Q9UIW2 1896 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms