RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TANGO6Q9C0B7 1094 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 SLC5A4Q9NY91 659 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 MPHOSPH10O00566 681 aaKnown RBP23.02■■□□□ 1.28
SCARF1-204ENST00000570902 MB21D1Q8N884 522 aa23.02■■□□□ 1.28
SCARF1-204ENST00000570902 SPATC1LQ9H0A9 340 aa23.02■■□□□ 1.28
SCARF1-204ENST00000570902 MCM9Q9NXL9 1143 aa23.02■■□□□ 1.28
SCARF1-204ENST00000570902 NAV1Q8NEY1 1877 aa23.01■■□□□ 1.27
SCARF1-204ENST00000570902 KBTBD13C9JR72 458 aa23.01■■□□□ 1.27
SCARF1-204ENST00000570902 GJC2Q5T442 439 aaPredicted RBP23.01■■□□□ 1.27
SCARF1-204ENST00000570902 CEP85Q6P2H3 762 aa23.01■■□□□ 1.27
SCARF1-204ENST00000570902 CUL9Q8IWT3 2517 aa23.01■■□□□ 1.27
SCARF1-204ENST00000570902 A0A1W2PRG0 241 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 SEPT4O43236 478 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 ERCC3P19447 782 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 HSP90AB4PQ58FF6 505 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 SLC9C2Q5TAH2 1124 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 TMEM179Q6ZVK1 233 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 GUCD1Q96NT3 240 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 MROH8Q9H579 483 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 EXOC6BQ9Y2D4 811 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 ATP11BQ9Y2G3 1177 aa23■■□□□ 1.27
SCARF1-204ENST00000570902 UNC80Q8N2C7 3258 aa22.99■■□□□ 1.27
SCARF1-204ENST00000570902 PDE6AP16499 860 aa22.99■■□□□ 1.27
SCARF1-204ENST00000570902 ZNF697Q5TEC3 545 aa22.99■■□□□ 1.27
SCARF1-204ENST00000570902 SLC39A5Q6ZMH5 540 aa22.99■■□□□ 1.27
SCARF1-204ENST00000570902 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.99■■□□□ 1.27
SCARF1-204ENST00000570902 ABRAQ8N0Z2 381 aa22.99■■□□□ 1.27
SCARF1-204ENST00000570902 SWAP70Q9UH65 585 aa22.99■■□□□ 1.27
SCARF1-204ENST00000570902 RLBP1P12271 317 aa22.98■■□□□ 1.27
SCARF1-204ENST00000570902 SH2D4AQ9H788 454 aa22.98■■□□□ 1.27
SCARF1-204ENST00000570902 A0A0G2JMZ2 1700 aa22.98■■□□□ 1.27
SCARF1-204ENST00000570902 LTBP2Q14767 1821 aa22.97■■□□□ 1.27
SCARF1-204ENST00000570902 FAM161BQ96MY7 647 aa22.97■■□□□ 1.27
SCARF1-204ENST00000570902 ARHGEF10LQ9HCE6 1279 aa22.97■■□□□ 1.27
SCARF1-204ENST00000570902 DCP1AQ9NPI6 582 aaPredicted RBP22.97■■□□□ 1.27
SCARF1-204ENST00000570902 ZNF532Q9HCE3 1301 aa22.97■■□□□ 1.27
SCARF1-204ENST00000570902 RLFQ13129 1914 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 COBLO75128 1261 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 FLOT1O75955 427 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 DSG3P32926 999 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 PLS1Q14651 629 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 SNX17Q15036 470 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 NCAPG2Q86XI2 1143 aa22.96■■□□□ 1.27
SCARF1-204ENST00000570902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.96■■□□□ 1.27
SCARF1-204ENST00000570902 PRDM5Q9NQX1 630 aaPredicted RBP22.96■■□□□ 1.27
SCARF1-204ENST00000570902 LAMA2P24043 3122 aaKnown RBP22.96■■□□□ 1.27
SCARF1-204ENST00000570902 MYCNP04198 464 aaPredicted RBP22.95■■□□□ 1.26
SCARF1-204ENST00000570902 ANO1Q5XXA6 986 aa22.95■■□□□ 1.26
SCARF1-204ENST00000570902 RHPN1Q8TCX5 695 aa22.95■■□□□ 1.26
SCARF1-204ENST00000570902 SDR42E1Q8WUS8 393 aa22.95■■□□□ 1.26
SCARF1-204ENST00000570902 COL25A1Q9BXS0 654 aaPredicted RBP22.95■■□□□ 1.26
SCARF1-204ENST00000570902 IL1RAPL2Q9NP60 686 aa22.95■■□□□ 1.26
SCARF1-204ENST00000570902 SLC25A27O95847 323 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 FCER1AP12319 257 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 EVX2Q03828 476 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 TRIM60Q495X7 471 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 C1orf53Q5VUE5 145 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 CLASRPQ8N2M8 674 aaKnown RBP22.94■■□□□ 1.26
SCARF1-204ENST00000570902 LCORLQ8N3X6 602 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 MAML3Q96JK9 1138 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 TMX2Q9Y320 296 aa22.94■■□□□ 1.26
SCARF1-204ENST00000570902 TCRBV5S4A2TA0A5A2 114 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 GOLIM4O00461 696 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 WDR46O15213 610 aaKnown RBP22.93■■□□□ 1.26
SCARF1-204ENST00000570902 ADCYAP1R1P41586 468 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 ICA1Q05084 483 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 LRRC41Q15345 812 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 SHHQ15465 462 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 KIAA1755Q5JYT7 1200 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 SLC44A5Q8NCS7 719 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 DNAJC2Q99543 621 aaKnown RBP22.93■■□□□ 1.26
SCARF1-204ENST00000570902 VCPKMTQ9H867 229 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 ATP8A2Q9NTI2 1148 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 NRBP1Q9UHY1 535 aa22.93■■□□□ 1.26
SCARF1-204ENST00000570902 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
SCARF1-204ENST00000570902 CYP2D6P10635 497 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 PRAMEF19Q5SWL8 479 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 AMOTL1Q8IY63 956 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 SPICE1Q8N0Z3 855 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 BADQ92934 168 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 ATG4CQ96DT6 458 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 CCDC17Q96LX7 622 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 PDLIM7Q9NR12 457 aa22.92■■□□□ 1.26
SCARF1-204ENST00000570902 AKR1B1P15121 316 aa22.91■■□□□ 1.26
SCARF1-204ENST00000570902 FAM47AQ5JRC9 791 aa22.91■■□□□ 1.26
SCARF1-204ENST00000570902 C9orf50Q5SZB4 431 aa22.91■■□□□ 1.26
SCARF1-204ENST00000570902 SIAH1Q8IUQ4 282 aa22.91■■□□□ 1.26
SCARF1-204ENST00000570902 KIF1BPQ96EK5 621 aa22.91■■□□□ 1.26
SCARF1-204ENST00000570902 RARBP10826 455 aa22.9■■□□□ 1.26
SCARF1-204ENST00000570902 SMAD3P84022 425 aaKnown RBP22.9■■□□□ 1.26
SCARF1-204ENST00000570902 TMEM132BQ14DG7 1078 aa22.9■■□□□ 1.26
SCARF1-204ENST00000570902 SAMD1Q6SPF0 538 aaPredicted RBP22.9■■□□□ 1.26
SCARF1-204ENST00000570902 FERMT2Q96AC1 680 aa22.9■■□□□ 1.26
SCARF1-204ENST00000570902 DYNLL2Q96FJ2 89 aa22.9■■□□□ 1.26
SCARF1-204ENST00000570902 MMP19Q99542 508 aa22.9■■□□□ 1.26
SCARF1-204ENST00000570902 CDX2Q99626 313 aaPredicted RBP22.9■■□□□ 1.26
SCARF1-204ENST00000570902 ARMT1Q9H993 441 aa22.9■■□□□ 1.26
SCARF1-204ENST00000570902 MYH8P13535 1937 aa22.89■■□□□ 1.25
SCARF1-204ENST00000570902 RNF180Q86T96 592 aa22.89■■□□□ 1.25
SCARF1-204ENST00000570902 DDRGK1Q96HY6 314 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms