RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 YTHDC1Q96MU7 727 aaKnown RBP14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 P2RX7Q99572 595 aaKnown RBP14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 RNF208Q9H0X6 261 aa14.88□□□□□ -0.03
CTDNEP1-205ENST00000570828 VCAM1P19320 739 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 SEPT2Q15019 361 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 ACER1Q8TDN7 264 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 PAGR1Q9BTK6 254 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 PCDHB15Q9Y5E8 787 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 SLC4A4Q9Y6R1 1079 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 MYH1P12882 1939 aa14.87□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 CHGBP05060 677 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 GJB1P08034 283 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 GJA8P48165 433 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 TMEM179Q6ZVK1 233 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 KBTBD3Q8NAB2 608 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 SHISA4Q96DD7 197 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 PUS7LQ9H0K6 701 aaKnown RBP14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 TXNRD2Q9NNW7 524 aa14.86□□□□□ -0.03
CTDNEP1-205ENST00000570828 MAPK4P31152 587 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 GUCY1A2P33402 732 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 ERVK-9P63128 1117 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 ERVK-24P63145 666 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 SOCS4Q8WXH5 440 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 DYNLL2Q96FJ2 89 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
CTDNEP1-205ENST00000570828 CYP2D7A0A087X1C5 515 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L12C9JPN9 530 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 USP17L21D6R901 530 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 ERC2O15083 957 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 PEX10O60683 326 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 HMGCRP04035 888 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 ZFYP08048 801 aaPredicted RBP14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 LRRFIP1Q32MZ4 808 aaKnown RBP14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 C12orf60Q5U649 245 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 U2AF1L4Q8WU68 220 aaKnown RBP14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 APPBP2Q92624 585 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 RPAP3Q9H6T3 665 aaPredicted RBP14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 ARPP21Q9UBL0 812 aaPredicted RBP14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
CTDNEP1-205ENST00000570828 MGAMO43451 1857 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 RNF113AO15541 343 aaKnown RBP14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 CDK8P49336 464 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 CCNA1P78396 465 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 ICA1Q05084 483 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 CATSPERGQ6ZRH7 1159 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 C16orf86Q6ZW13 317 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 CCDC17Q96LX7 622 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 NUDT12Q9BQG2 462 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 SH2D4AQ9H788 454 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 ARHGEF10LQ9HCE6 1279 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 GJD2Q9UKL4 321 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 RABGAP1Q9Y3P9 1069 aa14.83□□□□□ -0.04
CTDNEP1-205ENST00000570828 A0A1W2PRG0 241 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 GLRX3O76003 335 aaKnown RBP14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 AKR1B1P15121 316 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 CTR9Q6PD62 1173 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 OSBP2Q969R2 916 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 DEFB118Q96PH6 123 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 STRBPQ96SI9 672 aaKnown RBP14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 PORCNQ9H237 461 aa14.82□□□□□ -0.04
CTDNEP1-205ENST00000570828 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 GPAA1O43292 621 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 FARP2O94887 1054 aaPredicted RBP14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 SGPL1O95470 568 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 MX1P20591 662 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 CYP2B6P20813 491 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 Q3C1V9 767 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 POTEEQ6S8J3 1075 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 LBX2Q6XYB7 198 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 GPR142Q7Z601 462 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 PLEKHH3Q7Z736 793 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 CLEC10AQ8IUN9 316 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 OTUD7AQ8TE49 926 aaPredicted RBP14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 LPAR1Q92633 364 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 GCC1Q96CN9 775 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 FSD1Q9BTV5 496 aa14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 PAK6Q9NQU5 681 aaPredicted RBP14.81□□□□□ -0.04
CTDNEP1-205ENST00000570828 SMIM22K7EJ46 135 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 CNMDO75829 334 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 XRCC5P13010 732 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms