RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 LBX2Q6XYB7 198 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 MYPNQ86TC9 1320 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 RPAP3Q9H6T3 665 aaPredicted RBP13.26□□□□□ -0.29
SMG6-206ENST00000570668 TXNRD2Q9NNW7 524 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 RBPJLQ9UBG7 517 aa13.26□□□□□ -0.29
SMG6-206ENST00000570668 PLIN4Q96Q06 1357 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
SMG6-206ENST00000570668 RGS19P49795 217 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 PRKCZQ05513 592 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 CWC27Q6UX04 472 aaKnown RBP13.25□□□□□ -0.29
SMG6-206ENST00000570668 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
SMG6-206ENST00000570668 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMG6-206ENST00000570668 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
SMG6-206ENST00000570668 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
SMG6-206ENST00000570668 FGRP09769 529 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 FLT3LGP49771 235 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 ERVK-24P63145 666 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 ATP2B2Q01814 1243 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 CTDSPL2Q05D32 466 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 COG2Q14746 738 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 Q3C1V9 767 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 NEDD1Q8NHV4 660 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 COA7Q96BR5 231 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 GABRQQ9UN88 632 aa13.24□□□□□ -0.29
SMG6-206ENST00000570668 WDR46O15213 610 aaKnown RBP13.23□□□□□ -0.29
SMG6-206ENST00000570668 PEX10O60683 326 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 CNMDO75829 334 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 SOX10P56693 466 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 TFAP4Q01664 338 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 IRF5Q13568 498 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 CENPQQ7L2Z9 268 aaPredicted RBP13.23□□□□□ -0.29
SMG6-206ENST00000570668 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 MKL1Q969V6 931 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 PAGR1Q9BTK6 254 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 SYNPO2Q9UMS6 1093 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 RLFQ13129 1914 aa13.23□□□□□ -0.29
SMG6-206ENST00000570668 ORC4O43929 436 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 TTLL1O95922 423 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 MAPK4P31152 587 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 GRK4P32298 578 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 INCENPQ9NQS7 918 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
SMG6-206ENST00000570668 F5H6K3 240 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 FLOT1O75955 427 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 PCP11498 1178 aaKnown RBP13.21□□□□□ -0.29
SMG6-206ENST00000570668 DSG3P32926 999 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 CCNA1P78396 465 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 KLRC3Q07444 240 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 MB21D1Q8N884 522 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 PXYLP1Q8TE99 480 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 PORCNQ9H237 461 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 BTBD7Q9P203 1132 aa13.21□□□□□ -0.29
SMG6-206ENST00000570668 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.3
SMG6-206ENST00000570668 RAD50Q92878 1312 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 MYH4Q9Y623 1939 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 ADCY3O60266 1144 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 RANBP6O60518 1105 aaKnown RBP13.2□□□□□ -0.3
SMG6-206ENST00000570668 NDUFB10O96000 172 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 CHMLP26374 656 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
SMG6-206ENST00000570668 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 IL25Q9H293 177 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 ADAMTS5Q9UNA0 930 aa13.2□□□□□ -0.3
SMG6-206ENST00000570668 PARP14Q460N5 1801 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 ZNF213O14771 459 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 NOVP48745 357 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 HAND2P61296 217 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 AKNAD1Q5T1N1 836 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 GPR142Q7Z601 462 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 STAG1Q8WVM7 1258 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms