RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 SH3GLB1Q9Y371 365 aa10.02□□□□□ -0.81
TRIM25-203ENST00000570473 TACC3Q9Y6A5 838 aa10.02□□□□□ -0.81
TRIM25-203ENST00000570473 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
TRIM25-203ENST00000570473 TMEM247A6NEH6 219 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 TBX3O15119 743 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 ACTN4O43707 911 aaKnown RBP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 GBP2P32456 591 aaPredicted RBP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 HOXD12P35452 270 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 ETV3P41162 512 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 SIM2Q14190 667 aaPredicted RBP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 ARMC4Q5T2S8 1044 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 PDXDC2PQ6P474 469 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 MAATS1Q7Z4T9 603 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 SNX32Q86XE0 403 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 SPERTQ8NA61 448 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 NRBF2Q96F24 287 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 XAGE2Q96GT9 111 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 COG3Q96JB2 828 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 RPGRIP1Q96KN7 1286 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 SPZ1Q9BXG8 430 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 TYW1Q9NV66 732 aaKnown RBP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 SCHIP1Q9P0W5 487 aaPredicted RBP10.01□□□□□ -0.81
TRIM25-203ENST00000570473 ATPIF1Q9UII2 106 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 INSRP06213 1382 aa10.01□□□□□ -0.81
TRIM25-203ENST00000570473 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
TRIM25-203ENST00000570473 RAPGEF3O95398 923 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 MXI1P50539 228 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 SMTNP53814 917 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 BCL2A1Q16548 175 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 PABPC1LQ4VXU2 614 aaKnown RBP10□□□□□ -0.81
TRIM25-203ENST00000570473 NDUFAF5Q5TEU4 345 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 NEPROQ6NW34 567 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 ZNF449Q6P9G9 518 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 HDGFL2Q7Z4V5 671 aaPredicted RBP10□□□□□ -0.81
TRIM25-203ENST00000570473 YTHDF3Q7Z739 585 aaKnown RBP10□□□□□ -0.81
TRIM25-203ENST00000570473 GRAMD2AQ8IUY3 354 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 SLC15A3Q8IY34 581 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 LDHAL6BQ9BYZ2 381 aaPredicted RBP10□□□□□ -0.81
TRIM25-203ENST00000570473 CENPHQ9H3R5 247 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 VCPKMTQ9H867 229 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 CYP4F11Q9HBI6 524 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 PCDH12Q9NPG4 1184 aa10□□□□□ -0.81
TRIM25-203ENST00000570473 EVLQ9UI08 416 aaPredicted RBP10□□□□□ -0.81
TRIM25-203ENST00000570473 CYP27B1O15528 508 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 NMT2O60551 498 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 TADA3O75528 432 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 SMNDC1O75940 238 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM25-203ENST00000570473 POTEIP0CG38 1075 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 VAMP1P23763 118 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 EPS15P42566 896 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 TUBB4BP68371 445 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 ST5P78524 1137 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 C8orf74Q6P047 294 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 ZNF598Q86UK7 904 aaKnown RBP9.99□□□□□ -0.81
TRIM25-203ENST00000570473 LUZP1Q86V48 1076 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 CCDC13Q8IYE1 715 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 SPARTQ8N0X7 666 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 CCHCR1Q8TD31 782 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 IFT81Q8WYA0 676 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 SGCDQ92629 289 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 KAT2BQ92831 832 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 SKA1Q96BD8 255 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 CLMNQ96JQ2 1002 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 NR1H4Q96RI1 486 aaPredicted RBP9.99□□□□□ -0.81
TRIM25-203ENST00000570473 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 DDX56Q9NY93 547 aaKnown RBP9.99□□□□□ -0.81
TRIM25-203ENST00000570473 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.99□□□□□ -0.81
TRIM25-203ENST00000570473 NPATQ14207 1427 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 CNTLNQ9NXG0 1405 aa9.99□□□□□ -0.81
TRIM25-203ENST00000570473 ZMYM4Q5VZL5 1548 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 ARPC4-TTLL3A0A0A6YYG9 625 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 GOLGA6L7A0A1B0GV03 622 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 FIBPO43427 364 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 FOXD2O60548 495 aaPredicted RBP9.98□□□□□ -0.81
TRIM25-203ENST00000570473 RPS2P15880 293 aaKnown RBP9.98□□□□□ -0.81
TRIM25-203ENST00000570473 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 SCNN1BP51168 640 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 COPAP53621 1224 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 PDE1BQ01064 536 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 AMPD3Q01432 767 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 RUNX1T1Q06455 604 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 SULT2A1Q06520 285 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 SPIDRQ14159 915 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 KIF22Q14807 665 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 WHAMMP3Q1A5X7 153 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 TMEM95Q3KNT9 176 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 SPECC1Q5M775 1068 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 CCDC183Q5T5S1 534 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 MEX3CQ5U5Q3 659 aaKnown RBP9.98□□□□□ -0.81
TRIM25-203ENST00000570473 TSHZ3Q63HK5 1081 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 LMBRD2Q68DH5 695 aaPredicted RBP9.98□□□□□ -0.81
TRIM25-203ENST00000570473 DSTYKQ6XUX3 929 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 DBX2Q6ZNG2 339 aa9.98□□□□□ -0.81
TRIM25-203ENST00000570473 CCDC121Q6ZUS5 278 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms