RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 KRT32Q14532 448 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 TTF1Q15361 905 aaPredicted RBP9.23□□□□□ -0.93
TCF4-246ENST00000570287 KMT5BQ4FZB7 885 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 BLOC1S2Q6QNY1 142 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 DDX54Q8TDD1 881 aaKnown RBP9.23□□□□□ -0.93
TCF4-246ENST00000570287 ZDHHC16Q969W1 377 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 FRMD6Q96NE9 622 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 GOLGA6L6A8MZA4 724 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 F13A1P00488 732 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 GJB2P29033 226 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 IL15P40933 162 aaPredicted RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 ME3Q16798 604 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 ZNF589Q86UQ0 364 aaPredicted RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 RPS6KB1P23443 525 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 SATB1Q01826 763 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 RAB33AQ14088 237 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 NFE2Q16621 373 aaPredicted RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 ATG9AQ7Z3C6 839 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 ANKRD23Q86SG2 305 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 TSPAN18Q96SJ8 248 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 APBA2Q99767 749 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 ENAMQ9NRM1 1142 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 ATP8A1Q9Y2Q0 1164 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 NHSL1Q5SYE7 1610 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 HMGB1P1B2RPK0 211 aaPredicted RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 CIAO1O76071 339 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 FOSP01100 380 aaPredicted RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 TRIM50Q86XT4 487 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 SDR16C5Q8N3Y7 309 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 TATDN2Q93075 761 aa9.22□□□□□ -0.93
TCF4-246ENST00000570287 EDC3Q96F86 508 aaKnown RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.22□□□□□ -0.93
TCF4-246ENST00000570287 TOGARAM1Q9Y4F4 1720 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 ZNF335Q9H4Z2 1342 aaPredicted RBP9.21□□□□□ -0.93
TCF4-246ENST00000570287 PRPF3O43395 683 aaKnown RBP9.21□□□□□ -0.93
TCF4-246ENST00000570287 VIL1P09327 827 aaKnown RBP9.21□□□□□ -0.93
TCF4-246ENST00000570287 CD53P19397 219 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 ST3GAL1Q11201 340 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 MTA1Q13330 715 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 MCMDC2Q4G0Z9 681 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 NBPF5PQ86XG9 351 aaPredicted RBP9.21□□□□□ -0.93
TCF4-246ENST00000570287 KBTBD3Q8NAB2 608 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 NEUROD6Q96NK8 337 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 CEP89Q96ST8 783 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 ISCA1Q9BUE6 129 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.93
TCF4-246ENST00000570287 STRN4Q9NRL3 753 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 TPCN1Q9ULQ1 816 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 DOLKQ9UPQ8 538 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 TCHHQ07283 1943 aa9.21□□□□□ -0.93
TCF4-246ENST00000570287 ZNF609O15014 1411 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 PALLDQ8WX93 1383 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 SH3TC1Q8TE82 1336 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 EYA2O00167 538 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 NRDCO43847 1150 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 MUM1L1Q5H9M0 696 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
TCF4-246ENST00000570287 APPBP2Q92624 585 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 ST7Q9NRC1 585 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 TMOD3Q9NYL9 352 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 MTMR6Q9Y217 621 aa9.21□□□□□ -0.94
TCF4-246ENST00000570287 UBE2HP62256 183 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 TRIM28Q13263 835 aaKnown RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 CD44P16070 742 aaKnown RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 BRD3Q15059 726 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 ZKSCAN8Q15776 578 aaPredicted RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.2□□□□□ -0.94
TCF4-246ENST00000570287 TYW1Q9NV66 732 aaKnown RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 CNPY2Q9Y2B0 182 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 EFR3BQ9Y2G0 817 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 CD2APQ9Y5K6 639 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 SPEF2Q9C093 1822 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 PDCP20941 246 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 EXOSC10Q01780 885 aaKnown RBP9.2□□□□□ -0.94
TCF4-246ENST00000570287 TCIRG1Q13488 830 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 CCDC112Q8NEF3 446 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.2□□□□□ -0.94
TCF4-246ENST00000570287 HELLSQ9NRZ9 838 aa9.2□□□□□ -0.94
TCF4-246ENST00000570287 G3V3G9 751 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 FAM163BP0C2L3 166 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 TOB2Q14106 344 aaPredicted RBP9.19□□□□□ -0.94
TCF4-246ENST00000570287 DDX46Q7L014 1031 aaKnown RBP9.19□□□□□ -0.94
TCF4-246ENST00000570287 NECAB1Q8N987 351 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 ANAPC16Q96DE5 110 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 PAG1Q9NWQ8 432 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 ZNF446Q9NWS9 450 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.19□□□□□ -0.94
TCF4-246ENST00000570287 AK5Q9Y6K8 562 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 A6NHS1 94 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 IFRD1O00458 451 aaPredicted RBP9.19□□□□□ -0.94
TCF4-246ENST00000570287 NR1I2O75469 434 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 CNGA1P29973 690 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 IRS1P35568 1242 aa9.19□□□□□ -0.94
TCF4-246ENST00000570287 HNRNPH2P55795 449 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms