RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TOP1P11387 765 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 GMPSP49915 693 aaPredicted RBP12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 KIF5BP33176 963 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 TRIM29Q14134 588 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 RRP1BQ14684 758 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 GDF11O95390 407 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 UBE2HP62256 183 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 JAG1P78504 1218 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 AKAP17AQ02040 695 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 TMEM39BQ9GZU3 492 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 SCAND2PQ9GZW5 306 aaPredicted RBP12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 ELP1O95163 1332 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 CYTH3O43739 400 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 MBD3O95983 291 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 MMP1P03956 469 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
PDXDC1-216ENST00000569715 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 USP17L5A8MUK1 530 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 METTL16Q86W50 562 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 ZNF280AP59817 542 aaPredicted RBP12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
PDXDC1-216ENST00000569715 ATP2B2Q01814 1243 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 NR5A1Q13285 461 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 BRAPQ7Z569 592 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 FOXP4Q8IVH2 680 aaPredicted RBP12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 RGS22Q8NE09 1264 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 FAM151AQ8WW52 585 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 CLIC4Q9Y696 253 aa12.65□□□□□ -0.39
PDXDC1-216ENST00000569715 TTLL1O95922 423 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 U2AF2P26368 475 aaKnown RBP eCLIP12.64□□□□□ -0.399e-7■■■□□ 17.9
PDXDC1-216ENST00000569715 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 PDHBP11177 359 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 ZSCAN23Q3MJ62 389 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 CCDC17Q96LX7 622 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 GNL2Q13823 731 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 SEPT2Q15019 361 aa12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 TBC1D10BQ4KMP7 808 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
PDXDC1-216ENST00000569715 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 SCG2P13521 617 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 NPY5RQ15761 445 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 PHF20Q9BVI0 1012 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 MYO1BO43795 1136 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 PGAP2Q9UHJ9 254 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
PDXDC1-216ENST00000569715 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 FKBP1CQ5VVH2 108 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 GH2P01242 217 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 LIG1P18858 919 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 LMNB1P20700 586 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 GNAQP50148 359 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 MIGA2Q7L4E1 593 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 GAS2L3Q86XJ1 694 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 RTEL1Q9NZ71 1219 aa12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-216ENST00000569715 SNHG28P0DPA3 235 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 DPF2Q92785 391 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 FAM83AQ86UY5 434 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 POLR3EQ9NVU0 708 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms