RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 YEATS4O95619 227 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 TPRNQ4KMQ1 711 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 FOXP4Q8IVH2 680 aaPredicted RBP26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 LINC00301Q8NCQ3 95 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 ZBED3Q96IU2 234 aaPredicted RBP26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 VPS54Q9P1Q0 977 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 XBP1P17861 261 aa26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 GNL2Q13823 731 aaKnown RBP26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 PFKFB3Q16875 520 aaPredicted RBP26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 SPDYE2Q495Y8 402 aa26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 TATDN1Q6P1N9 297 aa26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 ZSCAN29Q8IWY8 852 aaPredicted RBP26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 ZNF70Q9UC06 446 aaPredicted RBP26.03■■□□□ 1.76
VCPKMT-205ENST00000569518 SYCE3A1L190 88 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 GOLGA6L4A6NEF3 574 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 SCG2P13521 617 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 LIG1P18858 919 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 RASGRP2Q7LDG7 609 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 LZTS2Q9BRK4 669 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 TMOD2Q9NZR1 351 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 ANO1Q5XXA6 986 aa26.02■■□□□ 1.76
VCPKMT-205ENST00000569518 FAM196BA6NMK8 535 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 CYTH3O43739 400 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 TTLL1O95922 423 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 PRELPP51888 382 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 NPY5RQ15761 445 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 FKBP1CQ5VVH2 108 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 CLEC10AQ8IUN9 316 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 MYH4Q9Y623 1939 aa26.01■■□□□ 1.75
VCPKMT-205ENST00000569518 CNTNAP1P78357 1384 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 PARP1P09874 1014 aaKnown RBP26■■□□□ 1.75
VCPKMT-205ENST00000569518 RASSF7Q02833 373 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 TNIP1Q15025 636 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 OXER1Q8TDS5 423 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 SPZ1Q9BXG8 430 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 CLRN2A0PK11 232 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 L1TD1Q5T7N2 865 aaKnown RBP26■■□□□ 1.75
VCPKMT-205ENST00000569518 LRSAM1Q6UWE0 723 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 KCNG4Q8TDN1 519 aa26■■□□□ 1.75
VCPKMT-205ENST00000569518 KLRF2D3W0D1 207 aa25.99■■□□□ 1.75
VCPKMT-205ENST00000569518 SNHG28P0DPA3 235 aa25.99■■□□□ 1.75
VCPKMT-205ENST00000569518 VEGFAP15692 232 aaPredicted RBP25.99■■□□□ 1.75
VCPKMT-205ENST00000569518 NR5A1Q13285 461 aa25.99■■□□□ 1.75
VCPKMT-205ENST00000569518 STK38Q15208 465 aa25.99■■□□□ 1.75
VCPKMT-205ENST00000569518 MTMR7Q9Y216 660 aa25.99■■□□□ 1.75
VCPKMT-205ENST00000569518 TCP10L2B9ZVM9 353 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 GOLGA8HP0CJ92 632 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 PDHBP11177 359 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 SMARCA1P28370 1054 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 MMP14P50281 582 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 CERKLQ49MI3 558 aaPredicted RBP25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 PPP4R3BQ5MIZ7 849 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 USP17L2Q6R6M4 530 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 FAM151AQ8WW52 585 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 PCDHA7Q9UN72 937 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 USP17L5A8MUK1 530 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 SPTLC2O15270 562 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 ME1P48163 572 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 ZNF280AP59817 542 aaPredicted RBP25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 SLC39A14Q15043 492 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 PTPAQ15257 358 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 LRRC47Q8N1G4 583 aaKnown RBP25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 BICD2Q8TD16 824 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 CSRNP1Q96S65 589 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 CLIP2Q9UDT6 1046 aa25.98■■□□□ 1.75
VCPKMT-205ENST00000569518 FZD9O00144 591 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 MPHOSPH10O00566 681 aaKnown RBP25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 RPS12P25398 132 aaKnown RBP25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 KRT2P35908 639 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 MRE11P49959 708 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 TOB1P50616 345 aaPredicted RBP25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 EIF6P56537 245 aaKnown RBP25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 SF3A1Q15459 793 aaKnown RBP25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 TNFRSF25Q93038 417 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 TRIM34Q9BYJ4 488 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 GRPEL1Q9HAV7 217 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 SPON1Q9HCB6 807 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 SH3GLB2Q9NR46 395 aa25.97■■□□□ 1.75
VCPKMT-205ENST00000569518 SHROOM1Q2M3G4 852 aaPredicted RBP25.96■■□□□ 1.75
VCPKMT-205ENST00000569518 DACT1Q9NYF0 836 aa25.96■■□□□ 1.75
VCPKMT-205ENST00000569518 A0A1W2PQ27 194 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 A0A1W2PQ64 194 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 A0A1W2PQD8 194 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 SHTN1A0MZ66 631 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 LETM1O95202 739 aaPredicted RBP25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 ASPRV1Q53RT3 343 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 RILPL1Q5EBL4 403 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 ADALQ6DHV7 355 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 MYOZ2Q9NPC6 264 aa25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 HERC5Q9UII4 1024 aaKnown RBP25.95■■□□□ 1.75
VCPKMT-205ENST00000569518 WNT10BO00744 389 aa25.95■■□□□ 1.74
VCPKMT-205ENST00000569518 FAM83AQ86UY5 434 aa25.95■■□□□ 1.74
VCPKMT-205ENST00000569518 DDX19AQ9NUU7 478 aaKnown RBP25.95■■□□□ 1.74
VCPKMT-205ENST00000569518 NR1I2O75469 434 aa25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 XRCC6P12956 609 aaKnown RBP eCLIP25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 TMEM179Q6ZVK1 233 aa25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 CCAR1Q8IX12 1150 aaKnown RBP25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 MKL1Q969V6 931 aa25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 GOLPH3LQ9H4A5 285 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms