RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 F6X3S4 739 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 H3BRJ5 948 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 PHACTR3Q96KR7 559 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 COPRSQ9NQ92 184 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 PRDM6Q9NQX0 595 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 TMEM39AQ9NV64 488 aa10.33□□□□□ -0.76
CDH11-216ENST00000569128 COL5A2P05997 1499 aaPredicted RBP10.33□□□□□ -0.76
CDH11-216ENST00000569128 COL14A1Q05707 1796 aaKnown RBP10.33□□□□□ -0.76
CDH11-216ENST00000569128 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
CDH11-216ENST00000569128 ENC1O14682 589 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 APAF1O14727 1248 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 B3GALT4O96024 378 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 DGKGP49619 791 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 HNRNPUQ00839 825 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDH11-216ENST00000569128 HGSNATQ68CP4 663 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 TOM1L2Q6ZVM7 507 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 DMRTC2Q8IXT2 367 aaPredicted RBP10.32□□□□□ -0.76
CDH11-216ENST00000569128 SLC7A3Q8WY07 619 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 RUNDC1Q96C34 613 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 RRP7AQ9Y3A4 280 aaKnown RBP10.32□□□□□ -0.76
CDH11-216ENST00000569128 PCDHGB7Q9Y5F8 929 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 WDR17Q8IZU2 1322 aa10.32□□□□□ -0.76
CDH11-216ENST00000569128 TLDC2A0PJX2 215 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 PAGE1O75459 146 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 NID1P14543 1247 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
CDH11-216ENST00000569128 COL9A3Q14050 684 aaPredicted RBP10.31□□□□□ -0.76
CDH11-216ENST00000569128 CCDC144BQ3MJ40 725 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 MEX3CQ5U5Q3 659 aaKnown RBP10.31□□□□□ -0.76
CDH11-216ENST00000569128 ERMP1Q7Z2K6 904 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 ENAMQ9NRM1 1142 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 ABCC6O95255 1503 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 PLCH1Q4KWH8 1693 aa10.31□□□□□ -0.76
CDH11-216ENST00000569128 SLIT2O94813 1529 aa10.3□□□□□ -0.76
CDH11-216ENST00000569128 DNAJA1P31689 397 aaKnown RBP10.3□□□□□ -0.76
CDH11-216ENST00000569128 PPP2R3AQ06190 1150 aa10.3□□□□□ -0.76
CDH11-216ENST00000569128 FAM117BQ6P1L5 589 aa10.3□□□□□ -0.76
CDH11-216ENST00000569128 USP48Q86UV5 1035 aa10.3□□□□□ -0.76
CDH11-216ENST00000569128 TCP11L2Q8N4U5 519 aa10.3□□□□□ -0.76
CDH11-216ENST00000569128 KBTBD4Q9NVX7 518 aa10.3□□□□□ -0.76
CDH11-216ENST00000569128 KDRP35968 1356 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 TNNI2P48788 182 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 RBL2Q08999 1139 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 SOGA3Q5TF21 947 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 DDX41Q9UJV9 622 aaKnown RBP10.29□□□□□ -0.76
CDH11-216ENST00000569128 NCAPD2Q15021 1401 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 AFF2P51816 1311 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 BCL9LQ86UU0 1499 aa10.29□□□□□ -0.76
CDH11-216ENST00000569128 FAM208AQ9UK61 1670 aaKnown RBP10.28□□□□□ -0.76
CDH11-216ENST00000569128 NRAPQ86VF7 1730 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 FSCN2O14926 492 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 ARHGEF15O94989 841 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 TMPOP42166 694 aaKnown RBP10.28□□□□□ -0.76
CDH11-216ENST00000569128 RACK1P63244 317 aaKnown RBP10.28□□□□□ -0.76
CDH11-216ENST00000569128 ARID5AQ03989 594 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 MTHFSDQ2M296 383 aaKnown RBP10.28□□□□□ -0.76
CDH11-216ENST00000569128 ZNF662Q6ZS27 426 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 RELL1Q8IUW5 271 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 UNC5CLQ8IV45 518 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 RSRP1Q9BUV0 290 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 SRA1Q9HD15 236 aaKnown RBP10.28□□□□□ -0.76
CDH11-216ENST00000569128 USP21Q9UK80 565 aa10.28□□□□□ -0.76
CDH11-216ENST00000569128 WIPF1O43516 503 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
CDH11-216ENST00000569128 LIG3P49916 1009 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 SNRPNP63162 240 aaKnown RBP10.27□□□□□ -0.77
CDH11-216ENST00000569128 GSTM4Q03013 218 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 C19orf57Q0VDD7 668 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 TRAPPC3LQ5T215 181 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 ZNF654Q8IZM8 581 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 TLR6Q9Y2C9 796 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 INPP5FQ9Y2H2 1132 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 MEGF6O75095 1541 aa10.27□□□□□ -0.77
CDH11-216ENST00000569128 CRB1P82279 1406 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 MINDY4BA8MYZ0 360 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 RLBP1P12271 317 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 ARL4DP49703 201 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 RIPK4P57078 832 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 SETDB1Q15047 1291 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 NFE2L2Q16236 605 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
CDH11-216ENST00000569128 STK35Q8TDR2 534 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 TMEM74Q96NL1 305 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
CDH11-216ENST00000569128 SPATA31A1Q5TZJ5 1347 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 SPATA31A5Q5VU36 1347 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 SPATA31A7Q8IWB4 1347 aa10.26□□□□□ -0.77
CDH11-216ENST00000569128 NWD2Q9ULI1 1742 aa10.25□□□□□ -0.77
CDH11-216ENST00000569128 NME2P22392 152 aa10.25□□□□□ -0.77
CDH11-216ENST00000569128 PWP1Q13610 501 aa10.25□□□□□ -0.77
CDH11-216ENST00000569128 DCTN1Q14203 1278 aa10.25□□□□□ -0.77
CDH11-216ENST00000569128 VPS72Q15906 364 aa10.25□□□□□ -0.77
CDH11-216ENST00000569128 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms