RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 HELLSQ9NRZ9 838 aa20.92■□□□□ 0.94
EDC3-215ENST00000569007 BIN2Q9UBW5 565 aaPredicted RBP20.92■□□□□ 0.94
EDC3-215ENST00000569007 A0A0D9SFI3 127 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 FOXP2O15409 715 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 PRDM1O75626 825 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 ELNP15502 786 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 EN2P19622 333 aaPredicted RBP20.91■□□□□ 0.94
EDC3-215ENST00000569007 MTFR1Q15390 333 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 VPS53Q5VIR6 699 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 TICAM2Q86XR7 235 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 SPICE1Q8N0Z3 855 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 LPAR1Q92633 364 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 TANGO6Q9C0B7 1094 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 VCPKMTQ9H867 229 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 RABGAP1Q9Y3P9 1069 aa20.91■□□□□ 0.94
EDC3-215ENST00000569007 SPDYE16A6NNV3 312 aaPredicted RBP20.9■□□□□ 0.94
EDC3-215ENST00000569007 CNMDO75829 334 aa20.9■□□□□ 0.94
EDC3-215ENST00000569007 PORCNQ9H237 461 aa20.9■□□□□ 0.94
EDC3-215ENST00000569007 ZNF287Q9HBT7 754 aa20.9■□□□□ 0.94
EDC3-215ENST00000569007 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
EDC3-215ENST00000569007 RBBP6Q7Z6E9 1792 aaKnown RBP20.9■□□□□ 0.94
EDC3-215ENST00000569007 PDE4DIPQ5VU43 2346 aa20.89■□□□□ 0.94
EDC3-215ENST00000569007 MAPK4P31152 587 aa20.89■□□□□ 0.93
EDC3-215ENST00000569007 PPARAQ07869 468 aa20.89■□□□□ 0.93
EDC3-215ENST00000569007 NMIQ13287 307 aaPredicted RBP20.89■□□□□ 0.93
EDC3-215ENST00000569007 COG2Q14746 738 aa20.89■□□□□ 0.93
EDC3-215ENST00000569007 MCMDC2Q4G0Z9 681 aa20.89■□□□□ 0.93
EDC3-215ENST00000569007 LBX2Q6XYB7 198 aa20.89■□□□□ 0.93
EDC3-215ENST00000569007 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.93
EDC3-215ENST00000569007 ZNF444Q8N0Y2 327 aaPredicted RBP20.89■□□□□ 0.93
EDC3-215ENST00000569007 PXYLP1Q8TE99 480 aa20.89■□□□□ 0.93
EDC3-215ENST00000569007 SLC3A2P08195 630 aaKnown RBP20.88■□□□□ 0.93
EDC3-215ENST00000569007 CCL5P13501 91 aa20.88■□□□□ 0.93
EDC3-215ENST00000569007 UBXN2AP68543 259 aa20.88■□□□□ 0.93
EDC3-215ENST00000569007 HOXC10Q9NYD6 342 aa20.88■□□□□ 0.93
EDC3-215ENST00000569007 BTBD7Q9P203 1132 aa20.88■□□□□ 0.93
EDC3-215ENST00000569007 GREB1LQ9C091 1923 aaPredicted RBP20.88■□□□□ 0.93
EDC3-215ENST00000569007 INHAP05111 366 aa20.87■□□□□ 0.93
EDC3-215ENST00000569007 CCNA1P78396 465 aa20.87■□□□□ 0.93
EDC3-215ENST00000569007 PDE4BQ07343 736 aa20.87■□□□□ 0.93
EDC3-215ENST00000569007 MKI67P46013 3256 aaKnown RBP20.87■□□□□ 0.93
EDC3-215ENST00000569007 IGKV6D-41A0A0C4DH26 115 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 WDR46O15213 610 aaKnown RBP20.86■□□□□ 0.93
EDC3-215ENST00000569007 RAD21O60216 631 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 FLOT1O75955 427 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 SDSP20132 328 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 PDE4AP27815 886 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 GPR142Q7Z601 462 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 PLEKHH3Q7Z736 793 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 ZNF589Q86UQ0 364 aaPredicted RBP20.86■□□□□ 0.93
EDC3-215ENST00000569007 GOPCQ9HD26 462 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 NYAP2Q9P242 653 aa20.86■□□□□ 0.93
EDC3-215ENST00000569007 DSG3P32926 999 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 CTDSPL2Q05D32 466 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 ALX1Q15699 326 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 FAM47AQ5JRC9 791 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 SOCS4Q8WXH5 440 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 NUDT12Q9BQG2 462 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 RNF208Q9H0X6 261 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 UNC93B1Q9H1C4 597 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
EDC3-215ENST00000569007 CLIP2Q9UDT6 1046 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 PLXNB2O15031 1838 aa20.85■□□□□ 0.93
EDC3-215ENST00000569007 RLFQ13129 1914 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 CYP2B6P20813 491 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 WDR78Q5VTH9 848 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 SAMD1Q6SPF0 538 aaPredicted RBP20.84■□□□□ 0.93
EDC3-215ENST00000569007 NEDD1Q8NHV4 660 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 ATG4CQ96DT6 458 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 CEP95Q96GE4 821 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 MTMR4Q9NYA4 1195 aa20.84■□□□□ 0.93
EDC3-215ENST00000569007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
EDC3-215ENST00000569007 FGAP02671 866 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 GJB1P08034 283 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 TSPY3P0CV98 308 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 TSPY8P0CW00 308 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 HSPD1P10809 573 aaKnown RBP20.83■□□□□ 0.93
EDC3-215ENST00000569007 TFAP4Q01664 338 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 MORN1Q5T089 497 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 FAM83BQ5T0W9 1011 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 USP6NLQ92738 828 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 DIAPH3Q9NSV4 1193 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 FBXO28Q9NVF7 368 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 ANAPC4Q9UJX5 808 aa20.83■□□□□ 0.93
EDC3-215ENST00000569007 PLIN4Q96Q06 1357 aa20.83■□□□□ 0.92
EDC3-215ENST00000569007 F5H6K3 240 aa20.82■□□□□ 0.92
EDC3-215ENST00000569007 NDUFB10O96000 172 aa20.82■□□□□ 0.92
EDC3-215ENST00000569007 HMGCRP04035 888 aa20.82■□□□□ 0.92
EDC3-215ENST00000569007 KLRC3Q07444 240 aa20.82■□□□□ 0.92
EDC3-215ENST00000569007 MB21D1Q8N884 522 aa20.82■□□□□ 0.92
EDC3-215ENST00000569007 NUP88Q99567 741 aaPredicted RBP20.82■□□□□ 0.92
EDC3-215ENST00000569007 MOV10L1Q9BXT6 1211 aaKnown RBP20.82■□□□□ 0.92
EDC3-215ENST00000569007 TACC3Q9Y6A5 838 aa20.82■□□□□ 0.92
EDC3-215ENST00000569007 TTLL1O95922 423 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 XRCC5P13010 732 aaKnown RBP20.81■□□□□ 0.92
EDC3-215ENST00000569007 RGS2P41220 211 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 TRIM32Q13049 653 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 CWC27Q6UX04 472 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms