RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 HTATIP2Q9BUP3 242 aa11.93□□□□□ -0.5
TNRC6A-215ENST00000568903 TRIM34Q9BYJ4 488 aa11.93□□□□□ -0.5
TNRC6A-215ENST00000568903 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
TNRC6A-215ENST00000568903 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
TNRC6A-215ENST00000568903 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 SOX1O00570 391 aaPredicted RBP11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 HMGCRP04035 888 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 HLA-DOAP06340 250 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 RAB3GAP1Q15042 981 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 USP6NLQ92738 828 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 ALPK3Q96L96 1907 aa11.92□□□□□ -0.5
TNRC6A-215ENST00000568903 RPTORQ8N122 1335 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 A0A1W2PRG0 241 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 GOLIM4O00461 696 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 PRKAB2O43741 272 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 PDE6AP16499 860 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 CCND3P30281 292 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 ERVK-9P63128 1117 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 ERVK-24P63145 666 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 MAP3K12Q12852 859 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 HIC1Q14526 733 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 CERKLQ49MI3 558 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 MAP3K21Q5TCX8 1036 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 GPR142Q7Z601 462 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 SLC44A5Q8NCS7 719 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 FLRT1Q9NZU1 646 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 BTBD7Q9P203 1132 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 SERPINB13Q9UIV8 391 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 ZMYND8Q9ULU4 1186 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 DNAH12Q6ZR08 3092 aa11.91□□□□□ -0.5
TNRC6A-215ENST00000568903 ZNF532Q9HCE3 1301 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 MYH1P12882 1939 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 TCRBV5S4A2TA0A5A2 114 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 SYN1P17600 705 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 MAP2K5Q13163 448 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 SEPT2Q15019 361 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 MORN1Q5T089 497 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 SLC9C2Q5TAH2 1124 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 LCORLQ8N3X6 602 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 FEZ1Q99689 392 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 NUDT12Q9BQG2 462 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 NR2E3Q9Y5X4 410 aa11.9□□□□□ -0.5
TNRC6A-215ENST00000568903 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 CYP2D7A0A087X1C5 515 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 VCAM1P19320 739 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 GABPAQ06546 454 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 LHX8Q68G74 356 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 CATSPERGQ6ZRH7 1159 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 C12orf42Q96LP6 360 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 EPAS1Q99814 870 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 EHD4Q9H223 541 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 ARMT1Q9H993 441 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 OGDHLQ9ULD0 1010 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 COL6A3P12111 3177 aa11.89□□□□□ -0.51
TNRC6A-215ENST00000568903 PFASO15067 1338 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 TRIM66O15016 1216 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 MAPK4P31152 587 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 TTC6Q86TZ1 520 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 ERC1Q8IUD2 1116 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 KIAA1683Q9H0B3 1180 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 RPAP3Q9H6T3 665 aaPredicted RBP11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
TNRC6A-215ENST00000568903 DDX60LQ5H9U9 1706 aaKnown RBP11.87□□□□□ -0.51
TNRC6A-215ENST00000568903 MPHOSPH10O00566 681 aaKnown RBP11.87□□□□□ -0.51
TNRC6A-215ENST00000568903 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
TNRC6A-215ENST00000568903 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
TNRC6A-215ENST00000568903 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
TNRC6A-215ENST00000568903 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
TNRC6A-215ENST00000568903 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms