RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SEPT2Q15019 361 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 CEP85Q6P2H3 762 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 TMEM179Q6ZVK1 233 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 MOV10L1Q9BXT6 1211 aaKnown RBP19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 SH2D4AQ9H788 454 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 MCM9Q9NXL9 1143 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 MPHOSPH10O00566 681 aaKnown RBP19.07■□□□□ 0.64
HERPUD1-215ENST00000568676 RTP1P59025 263 aa19.07■□□□□ 0.64
HERPUD1-215ENST00000568676 SLC9C2Q5TAH2 1124 aa19.07■□□□□ 0.64
HERPUD1-215ENST00000568676 TANGO6Q9C0B7 1094 aa19.07■□□□□ 0.64
HERPUD1-215ENST00000568676 PDE6AP16499 860 aa19.06■□□□□ 0.64
HERPUD1-215ENST00000568676 ERCC3P19447 782 aa19.06■□□□□ 0.64
HERPUD1-215ENST00000568676 ATN1P54259 1190 aaPredicted RBP19.06■□□□□ 0.64
HERPUD1-215ENST00000568676 TRPV1Q8NER1 839 aa19.06■□□□□ 0.64
HERPUD1-215ENST00000568676 ARHGEF10LQ9HCE6 1279 aa19.06■□□□□ 0.64
HERPUD1-215ENST00000568676 NRBP1Q9UHY1 535 aa19.06■□□□□ 0.64
HERPUD1-215ENST00000568676 NAV1Q8NEY1 1877 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 A0A1W2PRG0 241 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 DSG3P32926 999 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 ZNF697Q5TEC3 545 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 C1orf53Q5VUE5 145 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 SLC39A5Q6ZMH5 540 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 CLASRPQ8N2M8 674 aaKnown RBP19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 DCP1AQ9NPI6 582 aaPredicted RBP19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 EXOC6BQ9Y2D4 811 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 A0A0G2JMZ2 1700 aa19.05■□□□□ 0.64
HERPUD1-215ENST00000568676 SLC25A27O95847 323 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 SNX17Q15036 470 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 GJC2Q5T442 439 aaPredicted RBP19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 CCDC17Q96LX7 622 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 ATP8A2Q9NTI2 1148 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 ATP11BQ9Y2G3 1177 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 TMX2Q9Y320 296 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 A0A0C4DFX4 3053 aa19.04■□□□□ 0.64
HERPUD1-215ENST00000568676 ZNF532Q9HCE3 1301 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 WDR46O15213 610 aaKnown RBP19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 FLOT1O75955 427 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 RLBP1P12271 317 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 FCER1AP12319 257 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 AMOTL1Q8IY63 956 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 KIF1BPQ96EK5 621 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 GUCD1Q96NT3 240 aa19.03■□□□□ 0.64
HERPUD1-215ENST00000568676 TCRBV5S4A2TA0A5A2 114 aa19.02■□□□□ 0.64
HERPUD1-215ENST00000568676 COBLO75128 1261 aa19.02■□□□□ 0.64
HERPUD1-215ENST00000568676 NCAPG2Q86XI2 1143 aa19.02■□□□□ 0.64
HERPUD1-215ENST00000568676 MAML3Q96JK9 1138 aa19.02■□□□□ 0.64
HERPUD1-215ENST00000568676 VCPKMTQ9H867 229 aa19.02■□□□□ 0.64
HERPUD1-215ENST00000568676 LTBP2Q14767 1821 aa19.02■□□□□ 0.63
HERPUD1-215ENST00000568676 RLFQ13129 1914 aa19.02■□□□□ 0.63
HERPUD1-215ENST00000568676 HMMRO75330 724 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 IFIT2P09913 472 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 MS4A1P11836 297 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 COPB2P35606 906 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 ICA1Q05084 483 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 PLS1Q14651 629 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 SDR42E1Q8WUS8 393 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 IL1RAPL2Q9NP60 686 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 DIS3Q9Y2L1 958 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 CUL9Q8IWT3 2517 aa19.01■□□□□ 0.63
HERPUD1-215ENST00000568676 GOLIM4O00461 696 aa19■□□□□ 0.63
HERPUD1-215ENST00000568676 SMAD3P84022 425 aaKnown RBP19■□□□□ 0.63
HERPUD1-215ENST00000568676 LRRC41Q15345 812 aa19■□□□□ 0.63
HERPUD1-215ENST00000568676 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
HERPUD1-215ENST00000568676 LCORLQ8N3X6 602 aa19■□□□□ 0.63
HERPUD1-215ENST00000568676 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.634e-6■□□□□ 11.1
HERPUD1-215ENST00000568676 ROBO3Q96MS0 1386 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 RARBP10826 455 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 TRIM60Q495X7 471 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 ATG4CQ96DT6 458 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 DNAJC2Q99543 621 aaKnown RBP18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 PRDM5Q9NQX1 630 aaPredicted RBP18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 PDLIM7Q9NR12 457 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 ADAMTS5Q9UNA0 930 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
HERPUD1-215ENST00000568676 RAB11FIP3O75154 756 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 ADCYAP1R1P41586 468 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 SHHQ15465 462 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 RNF180Q86T96 592 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 RIOX2Q8IUF8 465 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 SIAH1Q8IUQ4 282 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 SLC44A5Q8NCS7 719 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 COL25A1Q9BXS0 654 aaPredicted RBP18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 KANSL2Q9H9L4 492 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 PHF24Q9UPV7 400 aa18.98■□□□□ 0.63
HERPUD1-215ENST00000568676 DNAH12Q6ZR08 3092 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 TMEM265A0A087WTH1 108 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 AKR1B1P15121 316 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 ADD2P35612 726 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 KCTD2Q14681 263 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 TMEM132BQ14DG7 1078 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 FAM47AQ5JRC9 791 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 KIAA1755Q5JYT7 1200 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 C12orf60Q5U649 245 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 ANO1Q5XXA6 986 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 SPICE1Q8N0Z3 855 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms